RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 CEACAM4O75871 244 aa16.42■□□□□ 0.22
YBX3-201ENST00000228251 ZNF14P17017 642 aaPredicted RBP16.42■□□□□ 0.22
YBX3-201ENST00000228251 APLNRP35414 380 aa16.42■□□□□ 0.22
YBX3-201ENST00000228251 UBA52P62987 128 aaKnown RBP16.42■□□□□ 0.22
YBX3-201ENST00000228251 THOC7Q6I9Y2 204 aaKnown RBP16.42■□□□□ 0.22
YBX3-201ENST00000228251 NANOS1Q8WY41 292 aaKnown RBP16.42■□□□□ 0.22
YBX3-201ENST00000228251 SLAMF9Q96A28 289 aa16.42■□□□□ 0.22
YBX3-201ENST00000228251 VRK1Q99986 396 aaPredicted RBP16.42■□□□□ 0.22
YBX3-201ENST00000228251 C12orf4Q9NQ89 552 aa16.42■□□□□ 0.22
YBX3-201ENST00000228251 C14orf166Q9Y224 244 aaKnown RBP16.42■□□□□ 0.22
YBX3-201ENST00000228251 ZFHX4Q86UP3 3567 aa16.42■□□□□ 0.22
YBX3-201ENST00000228251 C5orf51A6NDU8 294 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 J3QW42 95 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 AQP7O14520 342 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 PGAM2P15259 253 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 AP2S1P53680 142 aaPredicted RBP16.41■□□□□ 0.22
YBX3-201ENST00000228251 POC1AQ8NBT0 407 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 THAP6Q8TBB0 222 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 ST8SIA2Q92186 375 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 OR10C1Q96KK4 312 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 PLSCR2Q9NRY7 297 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 FAM221AA4D161 298 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 ZNF732B4DXR9 585 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 RLN2P04090 185 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 IGHV1-2P23083 117 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 HAAOP46952 286 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 PDCD1Q15116 288 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 AANATQ16613 207 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 SRSF7Q16629 238 aaKnown RBP eCLIP16.41■□□□□ 0.22
YBX3-201ENST00000228251 MYPOPQ86VE0 399 aaPredicted RBP16.41■□□□□ 0.22
YBX3-201ENST00000228251 SLC30A7Q8NEW0 376 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 MPC1Q9Y5U8 109 aa16.41■□□□□ 0.22
YBX3-201ENST00000228251 CNOT1A5YKK6 2376 aaKnown RBP16.4■□□□□ 0.22
YBX3-201ENST00000228251 TRAV17A0A0B4J275 112 aa16.4■□□□□ 0.22
YBX3-201ENST00000228251 C13orf42A0A1B0GVH6 325 aa16.4■□□□□ 0.22
YBX3-201ENST00000228251 TPD52L2O43399 206 aaKnown RBP16.4■□□□□ 0.22
YBX3-201ENST00000228251 NAPSAO96009 420 aa16.4■□□□□ 0.22
YBX3-201ENST00000228251 SLC22A25Q6T423 547 aa16.4■□□□□ 0.22
YBX3-201ENST00000228251 PRSS33Q8NF86 280 aa16.4■□□□□ 0.22
YBX3-201ENST00000228251 BOD1Q96IK1 185 aa16.4■□□□□ 0.22
YBX3-201ENST00000228251 ZNF286AQ9HBT8 521 aa16.4■□□□□ 0.22
YBX3-201ENST00000228251 OR7C1O76099 320 aaPredicted RBP16.39■□□□□ 0.21
YBX3-201ENST00000228251 SPDEFO95238 335 aa16.39■□□□□ 0.21
YBX3-201ENST00000228251 IFNA2P01563 188 aa16.39■□□□□ 0.21
YBX3-201ENST00000228251 ATXN7L3Q14CW9 347 aaPredicted RBP16.39■□□□□ 0.21
YBX3-201ENST00000228251 MPV17LQ2QL34 196 aa16.39■□□□□ 0.21
YBX3-201ENST00000228251 FBXW12Q6X9E4 464 aa16.39■□□□□ 0.21
YBX3-201ENST00000228251 MKXQ8IYA7 352 aa16.39■□□□□ 0.21
YBX3-201ENST00000228251 CXorf58Q96LI9 332 aa16.39■□□□□ 0.21
YBX3-201ENST00000228251 C2orf50Q96LR7 162 aa16.39■□□□□ 0.21
YBX3-201ENST00000228251 SLX1AQ9BQ83 275 aa16.39■□□□□ 0.21
YBX3-201ENST00000228251 TEX13DA0A0J9YY54 714 aaPredicted RBP16.38■□□□□ 0.21
YBX3-201ENST00000228251 hCG_1807616A0A1W2PRN6 198 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 MFSD2BA6NFX1 497 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 OR5B21A6NL26 309 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 TM4SF5O14894 197 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 SYNGR1O43759 233 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 KNG1P01042 644 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 UCP3P55916 312 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 RBM39Q14498 530 aaKnown RBP16.38■□□□□ 0.21
YBX3-201ENST00000228251 FAM214BQ7L5A3 538 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 P4HA3Q7Z4N8 544 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 BHLHE23Q8NDY6 225 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 OR5L1Q8NGL2 311 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 EXTL1Q92935 676 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 MOB3AQ96BX8 217 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 RRNAD1Q96FB5 475 aaKnown RBP16.38■□□□□ 0.21
YBX3-201ENST00000228251 PIK3IP1Q96FE7 263 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 IL36RNQ9UBH0 155 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 LHX6Q9UPM6 363 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 KANTRA0A1W2PQU2 76 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 PDGFAP04085 211 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 PRSS54Q6PEW0 395 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 CCDC36Q8IYA8 594 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 BATF2Q8N1L9 274 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 OR1S1Q8NH92 325 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 GALNT14Q96FL9 552 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 ZNF442Q9H7R0 627 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 RASL12Q9NYN1 266 aa16.38■□□□□ 0.21
YBX3-201ENST00000228251 ANKRD30BLA7E2S9 258 aa16.37■□□□□ 0.21
YBX3-201ENST00000228251 SHOXO15266 292 aa16.37■□□□□ 0.21
YBX3-201ENST00000228251 CNOT4O95628 575 aaKnown RBP16.37■□□□□ 0.21
YBX3-201ENST00000228251 CELA3BP08861 270 aa16.37■□□□□ 0.21
YBX3-201ENST00000228251 ZNF728P0DKX0 622 aa16.37■□□□□ 0.21
YBX3-201ENST00000228251 GABRA6Q16445 453 aa16.37■□□□□ 0.21
YBX3-201ENST00000228251 PLEKHN1Q494U1 663 aaPredicted RBP16.37■□□□□ 0.21
YBX3-201ENST00000228251 Q6ZT83 130 aa16.37■□□□□ 0.21
YBX3-201ENST00000228251 SGPP2Q8IWX5 399 aa16.37■□□□□ 0.21
YBX3-201ENST00000228251 PKIBQ9C010 78 aa16.37■□□□□ 0.21
YBX3-201ENST00000228251 C1orf123Q9NWV4 160 aa16.37■□□□□ 0.21
YBX3-201ENST00000228251 FRYQ5TBA9 3013 aa16.37■□□□□ 0.21
YBX3-201ENST00000228251 PRRC2CQ9Y520 2896 aaKnown RBP16.36■□□□□ 0.21
YBX3-201ENST00000228251 SMPD2O60906 423 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 ZNF205O95201 554 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 ZNF250P15622 560 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 COX5AP20674 150 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 FCGR2CP31995 323 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 KIR2DL2P43627 348 aaPredicted RBP16.36■□□□□ 0.21
YBX3-201ENST00000228251 GNG3P63215 75 aa16.36■□□□□ 0.21
YBX3-201ENST00000228251 IL24Q13007 206 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms