RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 LGI3Q8N145 548 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 TOMM40LQ969M1 308 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 C18orf12Q96KH6 178 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 MICU1Q9BPX6 476 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 RSRP1Q9BUV0 290 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 REPIN1Q9BWE0 567 aaKnown RBP18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 SMOC1Q9H4F8 434 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 FAM86C1Q9NVL1 165 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 ZNF581Q9P0T4 197 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 NSG2Q9Y328 171 aa18.98■□□□□ 0.63
SMARCD2-201ENST00000225742 PQLC2LA1A4F0 135 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 C9orf172C9J069 976 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 TOR1AO14656 332 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 SULT1A2P50226 295 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 RPL7L1Q6DKI1 246 aaKnown RBP18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 ZNF611Q8N823 705 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 SLC39A7Q92504 469 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 SLC7A10Q9NS82 523 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 FBXO9Q9UK97 447 aaPredicted RBP18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 CDK2AP1O14519 115 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 ABCD4O14678 606 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 ACTL6AO96019 429 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 MPLP40238 635 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 HERV-K104P61576 105 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 SPEM2Q0P670 501 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 MARS2Q96GW9 593 aaKnown RBP18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 ZNF442Q9H7R0 627 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 SLC2A9Q9NRM0 540 aa18.97■□□□□ 0.63
SMARCD2-201ENST00000225742 RTTNQ86VV8 2226 aa18.96■□□□□ 0.63
SMARCD2-201ENST00000225742 OR5AC1P0C628 307 aa18.96■□□□□ 0.63
SMARCD2-201ENST00000225742 PRSS12P56730 875 aa18.96■□□□□ 0.63
SMARCD2-201ENST00000225742 GPR157Q5UAW9 335 aa18.96■□□□□ 0.63
SMARCD2-201ENST00000225742 SLC25A26Q70HW3 274 aa18.96■□□□□ 0.63
SMARCD2-201ENST00000225742 SPAG16Q8N0X2 631 aa18.96■□□□□ 0.63
SMARCD2-201ENST00000225742 BOLLQ8N9W6 283 aaKnown RBP18.96■□□□□ 0.63
SMARCD2-201ENST00000225742 CLRN3Q8NCR9 226 aa18.96■□□□□ 0.63
SMARCD2-201ENST00000225742 APOBEC3DQ96AK3 386 aaPredicted RBP18.96■□□□□ 0.63
SMARCD2-201ENST00000225742 OPA3Q9H6K4 179 aa18.96■□□□□ 0.63
SMARCD2-201ENST00000225742 POMT1Q9Y6A1 747 aa18.96■□□□□ 0.63
SMARCD2-201ENST00000225742 ARR3P36575 388 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 SRPXP78539 464 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 ZNF169Q14929 603 aaPredicted RBP18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 TMEM164Q5U3C3 297 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 CALHM1Q8IU99 346 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 FOXRED2Q8IWF2 684 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 DYRK2Q92630 601 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 PARP11Q9NR21 331 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 FBXL17Q9UF56 701 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 AMDHD2Q9Y303 409 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 LSM5Q9Y4Y9 91 aaKnown RBP18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 KMT2EQ8IZD2 1858 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 LRP3O75074 770 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 CTRB1P17538 263 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 DUSP1P28562 367 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 CAV2P51636 162 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 FXYD4P59646 89 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 CTRB2Q6GPI1 263 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 OR2A2Q6IF42 318 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 TMEM105Q8N8V8 129 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 UBAC2Q8NBM4 344 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 OR4A4PQ8NGN8 299 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 SIGLEC12Q96PQ1 595 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 SEC11CQ9BY50 192 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 ARV1Q9H2C2 271 aa18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 PURGQ9UJV8 347 aaKnown RBP18.95■□□□□ 0.62
SMARCD2-201ENST00000225742 DOCK10Q96BY6 2186 aa18.94■□□□□ 0.62
SMARCD2-201ENST00000225742 NUPL2O15504 423 aaKnown RBP18.94■□□□□ 0.62
SMARCD2-201ENST00000225742 F10P00742 488 aa18.94■□□□□ 0.62
SMARCD2-201ENST00000225742 PRDX4Q13162 271 aa18.94■□□□□ 0.62
SMARCD2-201ENST00000225742 IL13RA2Q14627 380 aa18.94■□□□□ 0.62
SMARCD2-201ENST00000225742 OR1C1Q15619 314 aa18.94■□□□□ 0.62
SMARCD2-201ENST00000225742 LPAL2Q16609 132 aa18.94■□□□□ 0.62
SMARCD2-201ENST00000225742 CDCP2Q5VXM1 449 aa18.94■□□□□ 0.62
SMARCD2-201ENST00000225742 OR56B2PQ8NGI1 322 aa18.94■□□□□ 0.62
SMARCD2-201ENST00000225742 MSI2Q96DH6 328 aaKnown RBP18.94■□□□□ 0.62
SMARCD2-201ENST00000225742 TMED3Q9Y3Q3 217 aa18.94■□□□□ 0.62
SMARCD2-201ENST00000225742 F8W036 122 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 GPR137BO60478 399 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 OR7C1O76099 320 aaPredicted RBP18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 MBPP02686 304 aaPredicted RBP18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 TMEM33P57088 247 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 FGF12P61328 243 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 SRYQ05066 204 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 CEACAM21Q3KPI0 293 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 TCEAL6Q6IPX3 200 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 BRICD5Q6PL45 260 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 MRPL21Q7Z2W9 205 aaKnown RBP18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 DPPA2Q7Z7J5 298 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 TUSC5Q8IXB3 177 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 ZDHHC23Q8IYP9 409 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 TCEAL3Q969E4 200 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 IP6K3Q96PC2 410 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 AIFM2Q9BRQ8 373 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 PAPOLGQ9BWT3 736 aaKnown RBP18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 TTTY12Q9BZ98 90 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 TREM1Q9NP99 234 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 UQCC1Q9NVA1 299 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 FAM221AA4D161 298 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 FAM74A7A6NL05 159 aa18.93■□□□□ 0.62
SMARCD2-201ENST00000225742 SS18L1O75177 396 aaPredicted RBP18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms