RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 CRIPAKQ8N1N5 446 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 SEH1LQ96EE3 360 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 POM121L2Q96KW2 1035 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 DCTN5Q9BTE1 182 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 HOXD11P31277 338 aaPredicted RBP12.06□□□□□ -0.48
SIX4-201ENST00000216513 TIAL1Q01085 375 aaKnown RBP eCLIP12.06□□□□□ -0.48
SIX4-201ENST00000216513 KCNRGQ8N5I3 272 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 CLEC5AQ9NY25 188 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 A0A0G2JMZ2 1700 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 LRRC37A2A6NM11 1700 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 FXYD1O00168 92 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 THBS3P49746 956 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 VWA1Q6PCB0 445 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 SNRNP40Q96DI7 357 aaKnown RBP12.06□□□□□ -0.48
SIX4-201ENST00000216513 DNAJC13O75165 2243 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 SERTM2A0A1B0GWG4 89 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 SHISA5Q8N114 240 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 TMED6Q8WW62 240 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 ITLN1Q8WWA0 313 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 TAF9BQ9HBM6 251 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 CYTIPO60759 359 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 SRSF6Q13247 344 aaKnown RBP12.06□□□□□ -0.48
SIX4-201ENST00000216513 PRR27Q6MZM9 219 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 SMCO4Q9NRQ5 59 aa12.06□□□□□ -0.48
SIX4-201ENST00000216513 THADAQ6YHU6 1953 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 RFPL3SP0C7P2 107 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 SLC25A1P53007 311 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 TMEM267Q0VDI3 215 aaPredicted RBP12.05□□□□□ -0.48
SIX4-201ENST00000216513 SCARF2Q96GP6 870 aaPredicted RBP12.05□□□□□ -0.48
SIX4-201ENST00000216513 ZNF75AQ96N20 296 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 ZNF552Q9H707 407 aaPredicted RBP12.05□□□□□ -0.48
SIX4-201ENST00000216513 ECI1P42126 302 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 CDK5R1Q15078 307 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 TMEM268Q5VZI3 342 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 NSUN5P2Q63ZY6 315 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 SYS1Q8N2H4 156 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 C10orf111Q8N326 155 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 FAM212BQ9NTI7 297 aaPredicted RBP12.05□□□□□ -0.48
SIX4-201ENST00000216513 KRBOX1C9JBD0 128 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 RAB7AP51149 207 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 WDR38Q5JTN6 314 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 PXT1Q8NFP0 134 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 SMIM19Q96E16 107 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 V9GYS6 101 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 TAGLN2P37802 199 aaKnown RBP12.05□□□□□ -0.48
SIX4-201ENST00000216513 CD300CQ08708 224 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 OR8B12Q8NGG6 310 aa12.05□□□□□ -0.48
SIX4-201ENST00000216513 ZNF701M0R085 212 aaPredicted RBP12.04□□□□□ -0.48
SIX4-201ENST00000216513 KCTD12Q96CX2 325 aaKnown RBP12.04□□□□□ -0.48
SIX4-201ENST00000216513 DCTN6O00399 190 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 TMEM88Q6PEY1 159 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 ISYNA1Q9NPH2 558 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 SPINK4O60575 86 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 OR5H8P0DN80 308 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 BCL3P20749 454 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 REG1BP48304 166 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 RPL31P62899 125 aaKnown RBP12.04□□□□□ -0.48
SIX4-201ENST00000216513 KLK4Q9Y5K2 254 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 SIPA1L1O43166 1804 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 TRAV39A0A0B4J263 110 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 DNPH1O43598 174 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 TRAF3IP2O43734 574 aaPredicted RBP12.04□□□□□ -0.48
SIX4-201ENST00000216513 TSPAN2O60636 221 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 CYB5R3P00387 301 aaPredicted RBP12.04□□□□□ -0.48
SIX4-201ENST00000216513 RHOBP62745 196 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 CNOT1A5YKK6 2376 aaKnown RBP12.04□□□□□ -0.48
SIX4-201ENST00000216513 OPRK1P41145 380 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 GUCA2BQ16661 112 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 MESTQ5EB52 335 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 WFDC3Q8IUB2 231 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 MSRB3Q8IXL7 192 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 OR2D2Q9H210 308 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 AHCTF1Q8WYP5 2266 aa12.04□□□□□ -0.48
SIX4-201ENST00000216513 KRASP01116 189 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 OR10AC1Q8NH08 325 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 LILRB4Q8NHJ6 448 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 NPTNQ9Y639 398 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 A0A0D9SG52 128 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 RFPL4AA6NLU0 287 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 RFPL4AL1F8VTS6 287 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 SLC31A2O15432 143 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 SLC35B1P78383 322 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 RFPL4BQ6ZWI9 263 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 ZNF519Q8TB69 540 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 DYRK2Q92630 601 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 TMEM56Q96MV1 263 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 TRAT1Q6PIZ9 186 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 BAGE3Q86Y29 109 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 BAGE2Q86Y30 109 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 OIT3Q8WWZ8 545 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 NDUFB11Q9NX14 153 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 KCNAB3O43448 404 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 HTN1P15515 57 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 LRRTM1Q86UE6 522 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 GRAMD2BQ96HH9 432 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 FAAP24Q9BTP7 215 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 SRXN1Q9BYN0 137 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 ERVFRD-1P60508 538 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 ZNF85Q03923 595 aa12.03□□□□□ -0.48
SIX4-201ENST00000216513 ZNF418Q8TF45 676 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms