RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 CRYGSP22914 178 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 RPL12P30050 165 aaKnown RBP11.4□□□□□ -0.58
CTNS-201ENST00000046640 FCGR2CP31995 323 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 CAV2P51636 162 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 HIST1H3AP68431 136 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 ZNF92Q03936 586 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 PIGYQ3MUY2 71 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 HIST2H3PS2Q5TEC6 136 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 RBMS3Q6XE24 437 aaKnown RBP11.4□□□□□ -0.58
CTNS-201ENST00000046640 HIST2H3AQ71DI3 136 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 ARRDC1Q8N5I2 433 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 ADAMTS17Q8TE56 1095 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 OCSTAMPQ9BR26 566 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 FBXL17Q9UF56 701 aa11.4□□□□□ -0.58
CTNS-201ENST00000046640 C14orf166Q9Y224 244 aaKnown RBP11.4□□□□□ -0.58
CTNS-201ENST00000046640 ZNF587BE7ETH6 402 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 K7EPK0 472 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 C1QL1O75973 258 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 DIRAS3O95661 229 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 SERPINA7P05543 415 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 CPT2P23786 658 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 SPEM2Q0P670 501 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 RAB35Q15286 201 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 KRBOX4Q5JUW0 171 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 DHRS11Q6UWP2 260 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 FOXL2NBQ6ZUU3 175 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 FAM89BQ8N5H3 189 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 FAM71E2Q8N5Q1 922 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 POC1AQ8NBT0 407 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 MRPL24Q96A35 216 aaKnown RBP11.39□□□□□ -0.59
CTNS-201ENST00000046640 AMDHD2Q9Y303 409 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 EIF3GO75821 320 aaKnown RBP eCLIP11.39□□□□□ -0.59
CTNS-201ENST00000046640 ZNF708P17019 499 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 TBPP20226 339 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 NAAAQ02083 359 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 FAM209BQ5JX69 171 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 VAX1Q5SQQ9 334 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 DHRS13Q6UX07 377 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 SFT2D1Q8WV19 159 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 STRADBQ9C0K7 418 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 R4GN57 208 aa11.39□□□□□ -0.59
CTNS-201ENST00000046640 M0R036 132 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 GEMIN2O14893 280 aaKnown RBP11.38□□□□□ -0.59
CTNS-201ENST00000046640 MAGEA5P43359 124 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 TMEM33P57088 247 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 FOXO1Q12778 655 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 CPEB3Q8NE35 698 aaKnown RBP11.38□□□□□ -0.59
CTNS-201ENST00000046640 KCNE4Q8WWG9 221 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 ERGIC1Q969X5 290 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 INTS12Q96CB8 462 aaKnown RBP11.38□□□□□ -0.59
CTNS-201ENST00000046640 BORCS8Q96FH0 119 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 AQP10Q96PS8 301 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 TAAR9Q96RI9 348 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 SF3B5Q9BWJ5 86 aaKnown RBP11.38□□□□□ -0.59
CTNS-201ENST00000046640 WNT5BQ9H1J7 359 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 GPR35Q9HC97 309 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 IL17BQ9UHF5 180 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 OSGIN2Q9Y236 505 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 SHANK1Q9Y566 2161 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 C3orf80F5H4A9 247 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 SLC33A1O00400 549 aaPredicted RBP11.38□□□□□ -0.59
CTNS-201ENST00000046640 MSTNO14793 375 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 NRASP01111 189 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 HLA-HP01893 362 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 ZNF806P0C7X5 589 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 NOVA1P51513 510 aaKnown RBP11.38□□□□□ -0.59
CTNS-201ENST00000046640 ZNF133P52736 654 aaPredicted RBP11.38□□□□□ -0.59
CTNS-201ENST00000046640 PNLIPRP3Q17RR3 467 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 ATP1A1-AS1Q5TC04 95 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 IL34Q6ZMJ4 242 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 C5orf24Q7Z6I8 188 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 VASH2Q86V25 355 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 TUSC5Q8IXB3 177 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 KIRREL1Q96J84 757 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 ADGRG7Q96K78 797 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 RSRP1Q9BUV0 290 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 OR2H1Q9GZK4 316 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 EIF5A2Q9GZV4 153 aaKnown RBP11.38□□□□□ -0.59
CTNS-201ENST00000046640 OR51B6Q9H340 312 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 NOSIPQ9Y314 301 aaKnown RBP11.38□□□□□ -0.59
CTNS-201ENST00000046640 CACNA1HO95180 2353 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 TRAV20A0A0B4J274 112 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 IGKV1-12A0A0C4DH73 117 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 MRPL33O75394 65 aaKnown RBP11.38□□□□□ -0.59
CTNS-201ENST00000046640 NEURL1O76050 574 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 IFNA2P01563 188 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 IGKV1D-12P01611 117 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 IGHEP01854 428 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 PHLDA2Q53GA4 152 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 C10orf91Q5T1B1 145 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 ABHD17BQ5VST6 288 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 SULF2Q8IWU5 870 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 FNDC9Q8TBE3 224 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 NTNG2Q96CW9 530 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 SLC7A10Q9NS82 523 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 TIMM10BQ9Y5J6 103 aa11.38□□□□□ -0.59
CTNS-201ENST00000046640 BOD1L1Q8NFC6 3051 aa11.37□□□□□ -0.59
CTNS-201ENST00000046640 ACAA1P09110 424 aaPredicted RBP11.37□□□□□ -0.59
CTNS-201ENST00000046640 RPS2P15880 293 aaKnown RBP11.37□□□□□ -0.59
CTNS-201ENST00000046640 PEG10Q86TG7 708 aaKnown RBP11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms