RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Obp2aQ8K1H9 176 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Clint1Q99KN9 631 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Frem1Q684R7 2191 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Igkv13-85A0A075B666 115 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Igkv6-15A0A140T8M5 115 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 4930563M21RikA0A1L1SUT5 578 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Tomm5B1AXP6 51 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Adam6aB2RSY5 754 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Olfr225E9PWF9 419 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Vmn1r58G3X9U3 310 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 H2al1oL7MU04 110 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Gm21750L7N228 499 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 NlkO54949 527 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Nipsnap1O55125 284 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Kcnj15O88932 375 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Rab22aP35285 194 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Olfr1442Q0VEV7 312 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 B3gnt6Q3USF0 391 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Repin1Q5U4E2 545 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Sntb2Q61235 520 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 H2-M2Q6W9L1 343 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Hapln4Q80WM4 400 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Fbxo4Q8CHQ0 385 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Slc38a1Q8K2P7 485 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Neil1Q8K4Q6 389 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Slc25a28Q8R0Z5 364 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Aqp3Q8R2N1 292 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Olfr976Q8VF15 326 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Tram1Q91V04 374 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Hcfc1r1Q9CYQ5 120 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Actr6Q9D864 396 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Ropn1lQ9EQ00 218 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 PlpbpQ9Z2Y8 274 aa19.74■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Rnaset2aC0HKG5 259 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Rnaset2bC0HKG6 259 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Gm21560D3Z7A4 205 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Olfr250E9PV37 331 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Olfr520E9Q518 316 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Olfr430E9Q5F1 317 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Ccdc74aE9Q9U8 364 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Vmn1r67G5E8C1 305 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Defa-rs1P17533 116 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Oprm1P42866 398 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Acp5Q05117 327 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Mfsd2bQ3T9M1 494 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Q3TEI4 1023 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Ceacam19Q3TQ88 271 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Diras2Q5PR73 199 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Snrnp70Q62376 448 aaKnown RBP19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Alkal2Q80UG6 151 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Zfp955aQ80XR7 545 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Zer1Q80ZJ6 779 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Rps19bp1Q8C6B9 143 aaKnown RBP19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Gpat4Q8K2C8 456 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 GmppaQ922H4 420 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Znf672Q99LH4 468 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Arfgap3Q9D8S3 523 aa19.73■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Gm13083A2AGW5 501 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Zfp456B2RUK9 458 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Zfp688E9Q5M9 274 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Gm16434J3QN10 205 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Gm6803J3QPI8 144 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 4930555G01RikL7N253 205 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Dhrs3O88876 302 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 UbbP0CG49 305 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Nkain2Q4PNJ2 208 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Olfr331Q5NC44 324 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Spata22Q5SV06 358 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Ovch2Q7M761 609 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Aph1aQ8BVF7 265 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 C330021F23RikQ8C7T0 141 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Sf3b4Q8QZY9 424 aaKnown RBP19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Tor2aQ8R1J9 321 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Nt5mQ8VCE6 220 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Olfr1138Q8VFQ9 311 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Spef1Q99JL1 234 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 NosipQ9D6T0 301 aaKnown RBP19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Borcs8Q9D6Y4 120 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 MtfmtQ9D799 386 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Ndufa11Q9D8B4 141 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Slc2a8Q9JIF3 477 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Mapk7Q9WVS8 806 aa19.72■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Dock9Q8BIK4 2055 aa19.71■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Igkv14-126A0A075B5K0 117 aa19.71■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Gm15446D3Z5Y8 553 aa19.71■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Zfp977L7N2E7 438 aa19.71■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Gtf2f2Q8R0A0 249 aa19.71■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Olfr780Q8VEU0 312 aa19.71■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Rbms1Q91W59 403 aaKnown RBP19.71■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Eps8l3Q91WL0 600 aa19.71■□□□□ 0.75
Scn1b-201ENSMUST00000098548 Olfr68E9PYY2 315 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Bnip2O54940 326 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Kcnj1O88335 372 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Adra2cQ01337 458 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Ankrd33bQ3U0L2 486 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Q3UZV7 1028 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Dhrs9Q58NB6 319 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 Nxph2Q61199 261 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 SprQ64105 261 aa19.7■□□□□ 0.74
Scn1b-201ENSMUST00000098548 4930451G09RikQ8C5G4 195 aa19.7■□□□□ 0.74
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms