RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Olfr796Q8VGJ1 310 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Pla1aQ8VI78 456 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Cnih4Q9CX13 139 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Plpp6Q9D4F2 292 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Lhx6Q9R1R0 363 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Tsc22d3Q9Z2S7 137 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Dcst2A0A140LIJ0 701 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Kdf1A2A9F4 397 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr250E9PV37 331 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 2010315B03RikJ3QK55 433 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 3110021N24RikJ3QMN2 152 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 MgllO35678 303 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Alox12bO70582 701 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Pou2f1P25425 770 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Cd82P40237 266 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Hist1h3aP68433 136 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Atf1P81269 269 aaKnown RBP7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Hist1h3bP84228 136 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Srek1ip1Q4V9W2 153 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr142Q60881 305 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 PtafrQ62035 341 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Btn1a1Q62556 524 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Selenbp2Q63836 472 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Chst9Q76EC5 413 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr782Q7TRI2 314 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr598Q7TRR2 319 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Adam30Q811Q3 732 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Med19Q8C1S0 244 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Plcxd1Q8CHS4 345 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Sf3b4Q8QZY9 424 aaKnown RBP7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr815Q8VFU0 316 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr131Q8VGC8 314 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Il25Q8VHH8 169 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Glyr1Q922P9 546 aaKnown RBP7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 4930447A16RikQ9D5F6 132 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Htr6Q9R1C8 440 aa7.57□□□□□ -1.2
Trim39-201ENSMUST00000042717 Igkv6-15A0A140T8M5 115 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Cd46O88174 365 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Amy2P00688 508 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 GusbP12265 648 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 HhexP43120 271 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Cav3P51637 151 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 EnsaP60840 121 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Adra2aQ01338 450 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Samd12Q0VE29 161 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Tff3Q62395 81 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Ovch2Q7M761 609 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Klhl42Q8BFQ9 493 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm16503Q8C6M9 103 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Eddm3bQ8K0E4 149 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Spef1Q99JL1 234 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Rtl8bQ9D1F0 113 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Stub1Q9WUD1 304 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 NacaP70670 2187 aaKnown RBP7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Fcgr4A0A0B4J1G0 249 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm45736A0A1B0GS18 427 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Zmat3O54836 290 aaKnown RBP7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Tcl1b1P56840 116 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 H2-T22Q31615 379 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Hs3st6Q5GFD5 342 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Trav5d-4Q5R1F6 114 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 PcolceQ61398 468 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Msl2Q69ZF8 577 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Taf9bQ6NZA9 249 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Dact2Q7TN08 757 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Rgs7bpQ8BQP9 257 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Mfsd9Q8C0T7 466 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Mettl21eQ8CDZ2 244 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Tor2aQ8R1J9 321 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Tmem19Q91W52 336 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 CrtapQ9CYD3 400 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Tex44Q9DA60 530 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Q9DAN9 164 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr894Q9EQB2 313 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 Prss8Q9ESD1 342 aa7.56□□□□□ -1.2
Trim39-201ENSMUST00000042717 4930579F01RikE9Q3L6 325 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Vmn2r66K7N6R9 851 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Gm8229K7N749 213 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Dhrs3O88876 302 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 BlkP16277 499 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 B3gat2P59270 324 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Il18P70380 192 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Polr1dP97304 133 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Fam219bQ14DQ1 197 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Pafah1b3Q61205 232 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Vstm2lQ6PDS0 220 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Sema6dQ76KF0 1073 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Adam20Q7M763 760 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Olfr1101Q7TR59 310 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Wdfy2Q8BUB4 400 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Fam199xQ8K2D0 388 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Vmn1r192Q8K4C9 300 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Znhit1Q8R331 154 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Vmn1r51Q8VIC6 319 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Mrgpra4Q91WW2 313 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Xrcc2Q9CX47 278 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Cmss1Q9CZT6 276 aaKnown RBP7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 Arfgap3Q9D8S3 523 aa7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 SlirpQ9D8T7 112 aaKnown RBP7.55□□□□□ -1.2
Trim39-201ENSMUST00000042717 1700013G24RikQ9DAC6 286 aa7.55□□□□□ -1.2
Retrieved 100 of 22,080 RNA–protein pairs in 40.5 ms