RNA–Protein interactions for RNA: ENST00000637038.1

SCN1A-214, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 4,268 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-214ENST00000637038 LYPD6Q86Y78 171 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 DMRTC2Q8IXT2 367 aaPredicted RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 CD300LFQ8TDQ1 290 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 SMIM8Q96KF7 97 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF2Q9BSG1 426 aaPredicted RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 NICN1Q9BSH3 213 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 EMC6Q9BV81 110 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 PECRQ9BY49 303 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 BCO1Q9HAY6 547 aa3.5□□□□□ -1.85
SCN1A-214ENST00000637038 RCC2Q9P258 522 aaKnown RBP3.5□□□□□ -1.85
SCN1A-214ENST00000637038 PCSK5Q92824 1860 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 DHRS7CA6NNS2 312 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 UMAD1C9J7I0 102 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 F5H5K5 113 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 RNF224P0DH78 156 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 GABRR1P24046 479 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 CD80P33681 288 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 OR3A4PP47883 348 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 AKR1C2P52895 323 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 SUCLG1P53597 346 aaKnown RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 MTCP1P56278 107 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 CLDN17P56750 224 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 NXPH1P58417 271 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 QRFPP83859 136 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 AKR1C1Q04828 323 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 CHAF1BQ13112 559 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 TMEM176BQ3YBM2 270 aaPredicted RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 OTPQ5XKR4 325 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 RHBDD2Q6NTF9 364 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 SLC25A47Q6Q0C1 308 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 WDR74Q6RFH5 385 aaPredicted RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 FBXW12Q6X9E4 464 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 ZSCAN4Q8NAM6 433 aaPredicted RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 SUMF2Q8NBJ7 301 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 SEMA6DQ8NFY4 1073 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 OR1J1Q8NGS3 322 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 THAP3Q8WTV1 239 aaPredicted RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 GLYATL2Q8WU03 294 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 ULBP2Q9BZM5 246 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 SLC5A7Q9GZV3 580 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 NELFAQ9H3P2 528 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 C5orf66Q9H5L9 145 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 ACKR4Q9NPB9 350 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 PLEK2Q9NYT0 353 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 OSGIN2Q9Y236 505 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 PIGLQ9Y2B2 252 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 IGLV3-32A0A0A0MS00 114 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 IGHV1OR15-9A0A0B4J2B8 117 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 AQP7P3A6NL99 342 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 AGPAT2O15120 278 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 SOCS1O15524 211 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 TGOLN2O43493 480 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 H2AFB1P0C5Y9 115 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 OR8U9P0C7N5 309 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 PGA4P0DJD7 388 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 PGA3P0DJD8 388 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 OR5H8P0DN80 308 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 HLA-DOBP13765 273 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 FOLR2P14207 255 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 S100A2P29034 98 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 SFTPDP35247 375 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 ALDH3B1P43353 468 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 P2RY1P47900 373 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 RBM39Q14498 530 aaKnown RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 OR8B8Q15620 311 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 TBR1Q16650 682 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 C10orf91Q5T1B1 145 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 RPL7L1Q6DKI1 246 aaKnown RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF529Q6P280 563 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 CPEB2Q7Z5Q1 589 aaKnown RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 SFTPA2Q8IWL1 248 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 UBAC2Q8NBM4 344 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 OR13G1Q8NGZ3 307 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 SFT2D1Q8WV19 159 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 HAS2Q92819 552 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 TOMM40LQ969M1 308 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 TAAR9Q96RI9 348 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 NKX3-1Q99801 234 aaPredicted RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 TM2D1Q9BX74 207 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 TPSD1Q9BZJ3 242 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 CHST5Q9GZS9 411 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 ZNF768Q9H5H4 540 aaKnown RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 NAA60Q9H7X0 242 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 SPACA1Q9HBV2 294 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 KLHL13Q9P2N7 655 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 FBXL17Q9UF56 701 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 TMED3Q9Y3Q3 217 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 M0R135 149 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 SGCEO43556 437 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 ADAP1O75689 374 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 SNRNP70P08621 437 aaKnown RBP3.49□□□□□ -1.85
SCN1A-214ENST00000637038 PNLIPP16233 465 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 GLRA1P23415 457 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 S100PP25815 95 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 WNT5AP41221 380 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 KCNJ3P48549 501 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 EFNA3P52797 238 aa3.49□□□□□ -1.85
SCN1A-214ENST00000637038 EXT1Q16394 746 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms