RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 CEBPGP53567 150 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 SPCS3P61009 180 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 GABREP78334 506 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 PDZD11Q5EBL8 140 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 LYZL2Q7Z4W2 148 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 SLC35E3Q7Z769 313 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 SLC38A9Q8NBW4 561 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 EMC6Q9BV81 110 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 PLEKHJ1Q9NW61 149 aa13.63□□□□□ -0.23
CACNA1A-235ENST00000637004 TGIF2-C20orf24A0A0A6YYL0 155 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 H0YL77 283 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 COX5BP10606 129 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 FABP4P15090 132 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 ZNF43P17038 809 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 COL9A1P20849 921 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 OR1D4P47884 311 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 ZNF133P52736 654 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 CCL20P78556 96 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 GFI1BQ5VTD9 330 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 LIAT1Q6ZQX7 453 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 C1QL2Q7Z5L3 287 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 LGI3Q8N145 548 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 LURAP1Q96LR2 239 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 C2orf88Q9BSF0 95 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 WWTR1Q9GZV5 400 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 MCTS1Q9ULC4 181 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 CBY1Q9Y3M2 126 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 GON4LQ3T8J9 2241 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 B4DEV8 164 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 HSPA12AO43301 675 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 CELA2BP08218 269 aaPredicted RBP13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 LSM6P62312 80 aaKnown RBP13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 EWSR1Q01844 656 aaKnown RBP eCLIP13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 AKR1C8PQ5T2L2 129 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 SPSB3Q6PJ21 355 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 SLC16A14Q7RTX9 510 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 OR5R1Q8NH85 324 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 OR14L1PQ8NHC6 308 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 ST8SIA1Q92185 356 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 TOMM40LQ969M1 308 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 C18orf12Q96KH6 178 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 ZNF700Q9H0M5 742 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 ZNF319Q9P2F9 582 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 COPS7AQ9UBW8 275 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 AK3Q9UIJ7 227 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 HS3ST3B1Q9Y662 390 aa13.62□□□□□ -0.23
CACNA1A-235ENST00000637004 SPEGQ15772 3267 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 TMEM225BP0DP42 221 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 NDUFB7P17568 137 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 RAB4BP61018 213 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 OGFOD3Q6PK18 319 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 C6orf201Q7Z4U5 140 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 OR14K1Q8NGZ2 314 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 ELL3Q9HB65 397 aaPredicted RBP13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 NECAP2Q9NVZ3 263 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 RCL1Q9Y2P8 373 aaKnown RBP13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 WSB1Q9Y6I7 421 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 TMEM131Q92545 1883 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 IGKV3D-11A0A0A0MRZ8 115 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 KLK2P20151 261 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 HAGHQ16775 308 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 FAM57BQ71RH2 274 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 ZNF283Q8N7M2 679 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 OR13H1Q8NG92 308 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 DDIT4LQ96D03 193 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 BOD1Q96IK1 185 aa13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 MRPL13Q9BYD1 178 aaKnown RBP13.61□□□□□ -0.23
CACNA1A-235ENST00000637004 SMCO3A2RU48 225 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 METTL12A8MUP2 240 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 TRGC1P0CF51 173 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 ATP6V0CP27449 155 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 CLRN1P58418 232 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 TMEM176BQ3YBM2 270 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 ZNF542PQ5EBM4 170 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 ZNF506Q5JVG8 444 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 C1orf87Q8N0U7 546 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 FBXL14Q8N1E6 418 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 ZFP62Q8NB50 900 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 CCDC54Q8NEL0 328 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 OR52M1Q8NGK5 317 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 FAM210BQ96KR6 192 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 PACRGQ96M98 296 aaPredicted RBP13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 SYT3Q9BQG1 590 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 TGIF2Q9GZN2 237 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 PRO1933Q9H354 126 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 SERINC1Q9NRX5 453 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 LIPGQ9Y5X9 500 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 ZNF850A8MQ14 1090 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 SCAF4O95104 1147 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 CTSEP14091 401 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 SSPNQ14714 243 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 OR2C3Q8N628 320 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 CYB561D1Q8N8Q1 229 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 OR10AD1Q8NGE0 317 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 RBMXL1Q96E39 390 aaKnown RBP13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 SOHLH2Q9NX45 425 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 HS3ST3A1Q9Y663 406 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 SLCO1B1Q9Y6L6 691 aa13.6□□□□□ -0.23
CACNA1A-235ENST00000637004 MKRN2OSH3BPM6 223 aa13.59□□□□□ -0.23
CACNA1A-235ENST00000637004 PAX1P15863 534 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms