RNA–Protein interactions for RNA: ENST00000635562.1

PSPC1-208, Transcript of paraspeckle component 1, humanhuman

TSL 3

Gene PSPC1, Length 422 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-208ENST00000635562 NR2C2APQ86WQ0 139 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 CBLN2Q8IUK8 224 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 OR4N5Q8IXE1 308 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 OR4D11Q8NGI4 311 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 OR13C4Q8NGS5 318 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 OR8U1Q8NH10 309 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 FBXO25Q8TCJ0 367 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 GNPDA2Q8TDQ7 276 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 PYROXD1Q8WU10 500 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 ACOT12Q8WYK0 555 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 APOBEC3DQ96AK3 386 aaPredicted RBP2.4□□□□□ -2.03
PSPC1-208ENST00000635562 PPCDCQ96CD2 204 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 ZMYND19Q96E35 227 aaPredicted RBP2.4□□□□□ -2.03
PSPC1-208ENST00000635562 DYNLL2Q96FJ2 89 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 ST6GAL2Q96JF0 529 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 HSFY1Q96LI6 401 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 C4orf45Q96LM5 186 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 COL21A1Q96P44 957 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF382Q96SR6 550 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 SORT1Q99523 831 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 CDX2Q99626 313 aaPredicted RBP2.4□□□□□ -2.03
PSPC1-208ENST00000635562 MARVELD1Q9BSK0 173 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 URM1Q9BTM9 101 aaKnown RBP2.4□□□□□ -2.03
PSPC1-208ENST00000635562 TRAF4Q9BUZ4 470 aaPredicted RBP2.4□□□□□ -2.03
PSPC1-208ENST00000635562 HES7Q9BYE0 225 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 TBL1XR1Q9BZK7 514 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 VCXQ9H320 206 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 RBKSQ9H477 322 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 METTL17Q9H7H0 456 aaPredicted RBP2.4□□□□□ -2.03
PSPC1-208ENST00000635562 MEPEQ9NQ76 525 aaPredicted RBP2.4□□□□□ -2.03
PSPC1-208ENST00000635562 NIT2Q9NQR4 276 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 MED29Q9NX70 200 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 COMMD9Q9P000 198 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 DNAJC12Q9UKB3 198 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 CES1P1Q9UKY3 287 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 SLC7A7Q9UM01 511 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 ING4Q9UNL4 249 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 OR51B2Q9Y5P1 312 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 R4GN57 208 aa2.4□□□□□ -2.03
PSPC1-208ENST00000635562 CPSF1Q10570 1443 aaKnown RBP2.4□□□□□ -2.03
PSPC1-208ENST00000635562 MED14O60244 1454 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 ANKRD36BQ8N2N9 1353 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 BAZ2AQ9UIF9 1905 aaKnown RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 IGHV2OR16-5A0A0B4J2B6 119 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 A0A1W2PRE2 83 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 MAP1LC3B2A6NCE7 125 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 OR5H1A6NKK0 313 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 FAM166BA8MTA8 275 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 TRIM49D1C9J1S8 452 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 SMKR1H3BMG3 65 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 K7EMT4 169 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 K7ERU9 68 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 BMPR1BO00238 502 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 GABRPO00591 440 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 BUB3O43684 328 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 CRLF1O75462 422 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 GCM2O75603 506 aaPredicted RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 GAS8-AS1O95177 125 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 GADD45GO95257 159 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 PTTG1O95997 202 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 PAK4O96013 591 aaPredicted RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 RENP00797 406 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 C1QBP02746 253 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 ARG1P05089 322 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 HOXB7P09629 217 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 OR8U8P0C7N1 319 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF806P0C7X5 589 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 IGHV4-31P0DP07 118 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 LIFP15018 202 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 ZNF250P15622 560 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 RPL35AP18077 110 aaKnown RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 CD34P28906 385 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 DDTP30046 118 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 PTGDSP41222 190 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 TSFMP43897 325 aaKnown RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 GALR1P47211 349 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 EVX1P49640 407 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 GZMMP51124 257 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 HNRNPA3P51991 378 aaKnown RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 TPI1P60174 286 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 KRTAP10-5P60370 271 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 HSPE1P61604 102 aaKnown RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 RPS18P62269 152 aaKnown RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 SNRPD1P62314 119 aaKnown RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 RUNX1Q01196 453 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 EMX1Q04741 257 aaPredicted RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 SRSF9Q13242 221 aaKnown RBP eCLIP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 BIKQ13323 160 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 EIF2B1Q14232 305 aaKnown RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 PMVKQ15126 192 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 CDK10Q15131 360 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 OR8G1Q15617 311 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 CD226Q15762 336 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 DUSP5Q16690 384 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 ACOT6Q3I5F7 207 aaPredicted RBP2.39□□□□□ -2.03
PSPC1-208ENST00000635562 TECRLQ5HYJ1 363 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 ATAD3CQ5T2N8 411 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 FAM162BQ5T6X4 162 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 PVRIGQ6DKI7 326 aa2.39□□□□□ -2.03
PSPC1-208ENST00000635562 OR10K2Q6IF99 312 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms