RNA–Protein interactions for RNA: ENST00000635392.1

SMARCA2-240, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, human

TSL 5

Gene SMARCA2, Length 291 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMARCA2-240	ENST00000635392	CASC3	O15234	703 aa	Known RBP	4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	NSA2	O95478	260 aa	Known RBP	4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	OTC	P00480	354 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	SERPINA5	P05154	406 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	GIP	P09681	153 aa	Predicted RBP	4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	CSF3	P09919	207 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	ZNF250	P15622	560 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	ZNF17	P17021	662 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	STOM	P27105	288 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	DCK	P27707	260 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	SERPINB5	P36952	375 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	RPS5	P46782	204 aa	Known RBP	4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	GABRA4	P48169	554 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	CCNG1	P51959	295 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	CRISP3	P54108	245 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	KRTAP10-5	P60370	271 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	ACTA2	P62736	377 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	VSNL1	P62760	191 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	ACTG2	P63267	376 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	ACTC1	P68032	377 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	ACTA1	P68133	377 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	REEP5	Q00765	189 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	UNC119	Q13432	240 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	NCF4	Q15080	339 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	OR4D1	Q15615	310 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	KCTD19	Q17RG1	926 aa	Predicted RBP	4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	MED27	Q6P2C8	311 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	CMC1	Q7Z7K0	106 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	BPIFC	Q8NFQ6	507 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	OR10R2	Q8NGX6	335 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	NT5C	Q8TCD5	201 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	KCTD4	Q8WVF5	259 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	WDR34	Q96EX3	536 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	AURKB	Q96GD4	344 aa	Predicted RBP	4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	OR2A5	Q96R48	311 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	FAM60A	Q9NP50	221 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	LYAR	Q9NX58	379 aa	Known RBP	4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	SLC25A37	Q9NYZ2	338 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	ZNF282	Q9UDV7	671 aa	Predicted RBP	4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	LGALS13	Q9UHV8	139 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	TBC1D24	Q9ULP9	559 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	DMXL2	Q8TDJ6	3036 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	USP24	Q9UPU5	2620 aa		4.06	□□□□□ -1.76
SMARCA2-240	ENST00000635392	PHF3	Q92576	2039 aa	Known RBP	4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	FAM208B	Q5VWN6	2430 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	PTPRQ	Q9UMZ3	2332 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	TRAV39	A0A0B4J263	110 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	IGKV1-8	A0A0C4DH67	115 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392		H0YHG0	523 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	EIF4E2	O60573	245 aa	Known RBP	4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	PIAS1	O75925	651 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	UTS2	O95399	124 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	MYL2	P10916	166 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	HPGD	P15428	266 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	PSMB5	P28074	263 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	CX3CR1	P49238	355 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	SH3BGR	P55822	239 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	DNAJB13	P59910	316 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	IFT88	Q13099	833 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	MAB21L1	Q13394	359 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	KRT71	Q3SY84	523 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	MLIP	Q5VWP3	458 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	TTC19	Q6DKK2	380 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	MBOAT1	Q6ZNC8	495 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	PAGE2	Q7Z2X7	111 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	CMTM1	Q8IZ96	169 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	FAM71E2	Q8N5Q1	922 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	OR2Y1	Q8NGV0	311 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	ZNF502	Q8TBZ5	544 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	MARCH1	Q8TCQ1	289 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	SLC7A13	Q8TCU3	470 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	CT55	Q8WUE5	264 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	PIK3IP1	Q96FE7	263 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	OR4K3	Q96R72	315 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	SERPINI1	Q99574	410 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	PAIP2	Q9BPZ3	127 aa	Known RBP	4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	OSBPL10	Q9BXB5	764 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	SHCBP1L	Q9BZQ2	653 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	DNTTIP1	Q9H147	329 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	PRORY	Q9H606	182 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	CLMP	Q9H6B4	373 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	MS4A12	Q9NXJ0	267 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	MTCH1	Q9NZJ7	389 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	PDP1	Q9P0J1	537 aa	Predicted RBP	4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	SPTA1	P02549	2419 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	FRY	Q5TBA9	3013 aa		4.05	□□□□□ -1.76
SMARCA2-240	ENST00000635392	FREM2	Q5SZK8	3169 aa		4.04	□□□□□ -1.76
SMARCA2-240	ENST00000635392	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.04	□□□□□ -1.76
SMARCA2-240	ENST00000635392	IGLV3-12	A0A075B6K2	115 aa		4.04	□□□□□ -1.76
SMARCA2-240	ENST00000635392	SMIM23	A6NLE4	172 aa		4.04	□□□□□ -1.76
SMARCA2-240	ENST00000635392		A8MU10	97 aa		4.04	□□□□□ -1.76
SMARCA2-240	ENST00000635392	FAM25E	A8MYX2	175 aa		4.04	□□□□□ -1.76
SMARCA2-240	ENST00000635392	MKRN2OS	H3BPM6	223 aa		4.04	□□□□□ -1.76
SMARCA2-240	ENST00000635392	TEX46	H3BTG2	121 aa		4.04	□□□□□ -1.76
SMARCA2-240	ENST00000635392	BIRC5	O15392	142 aa		4.04	□□□□□ -1.76
SMARCA2-240	ENST00000635392	SEMA3D	O95025	777 aa		4.04	□□□□□ -1.76
SMARCA2-240	ENST00000635392	IGLV2-23	P01705	113 aa		4.04	□□□□□ -1.76
SMARCA2-240	ENST00000635392	GSTM3	P21266	225 aa		4.04	□□□□□ -1.76
SMARCA2-240	ENST00000635392	GTF2E2	P29084	291 aa	Known RBP	4.04	□□□□□ -1.76
SMARCA2-240	ENST00000635392	SLCO1A2	P46721	670 aa		4.04	□□□□□ -1.76

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