RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 OR51T1Q8NGJ9 327 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 TNFAIP8L1Q8WVP5 186 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 WDYHV1Q96HA8 205 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 ZNF479Q96JC4 524 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 SPACA5Q96QH8 159 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 C1QTNF5Q9BXJ0 243 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 ZNF436Q9C0F3 470 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-230ENST00000634433 METTL9Q9H1A3 318 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 DEFB127Q9H1M4 99 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 BEX1Q9HBH7 125 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 MYOZ1Q9NP98 299 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-230ENST00000634433 ZNF224Q9NZL3 707 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 TRAV17A0A0B4J275 112 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 PCP4L1A6NKN8 68 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 PYCARD-AS1I3L0S3 204 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 NKX2-8O15522 239 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 ZNF780AO75290 641 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-230ENST00000634433 HPXP02790 462 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 IFNA6P05013 189 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 HIST1H1DP16402 221 aaKnown RBP6.21□□□□□ -1.42
BRCA1-230ENST00000634433 EGR1P18146 543 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 MTCP1P56278 107 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 RPS27AP62979 156 aaKnown RBP6.21□□□□□ -1.42
BRCA1-230ENST00000634433 PLP2Q04941 152 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 MALLQ13021 153 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 SLC22A6Q4U2R8 563 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 FAAP20Q6NZ36 180 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 SLC36A1Q7Z2H8 476 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 FAM89BQ8N5H3 189 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 GRPEL2Q8TAA5 225 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 ZNF431Q8TF32 576 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-230ENST00000634433 ASB13Q8WXK3 278 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 SLAMF9Q96A28 289 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 OPN3Q9H1Y3 402 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-230ENST00000634433 C12orf4Q9NQ89 552 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 SLC2A8Q9NY64 477 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 NPTNQ9Y639 398 aa6.21□□□□□ -1.42
BRCA1-230ENST00000634433 CNOT1A5YKK6 2376 aaKnown RBP6.2□□□□□ -1.42
BRCA1-230ENST00000634433 C5orf63A6NC05 138 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 FAM90A18PA6NE21 464 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 FAM90A16PA6NEW6 464 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 SLC22A20A6NK97 555 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 FAM90A9PA6NNJ1 464 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 FAM90A5PA8MXJ8 464 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 LGALS8O00214 317 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 KCNAB3O43448 404 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 CA11O75493 328 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 NRASP01111 189 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 SERPINA5P05154 406 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 FAM90A15PP0C7V4 464 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 FAM90A14PP0C7W9 464 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 GSTT2P0CG29 244 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 GNB3P16520 340 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 ANXA7P20073 488 aaKnown RBP6.2□□□□□ -1.42
BRCA1-230ENST00000634433 C4BPBP20851 252 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 RBP2P50120 134 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 FUT6P51993 359 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 ATP1B3P54709 279 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 IFITM2Q01629 132 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 SFRP5Q5T4F7 317 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 IDO2Q6ZQW0 420 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 P4HA3Q7Z4N8 544 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 SPSB4Q96A44 273 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 BORCS8Q96FH0 119 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 C1orf147Q96MC9 270 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-230ENST00000634433 TM2D1Q9BX74 207 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 GPR173Q9NS66 373 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 KLK13Q9UKR3 277 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 CHD8Q9HCK8 2581 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 MED13Q9UHV7 2174 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 PTPRBP23467 1997 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 ZNF816-ZNF321PA0A0X1KG74 233 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 WIPF3A6NGB9 483 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 SERPINE3A8MV23 424 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 H7C1Q1 480 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 IGHV3-9P01782 118 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 IGHG3P01860 377 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 GIPP09681 153 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-230ENST00000634433 PATE4P0C8F1 98 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 TMEM225BP0DP42 221 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 MGMTP16455 207 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 MPGP29372 298 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 GNG10P50151 68 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 RAP2BP61225 183 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 TMEM42Q69YG0 159 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 COLCA1Q6ZS62 124 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 ZDHHC22Q8N966 263 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 OR4D10Q8NGI6 311 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 FGFBP3Q8TAT2 258 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 CACNG8Q8WXS5 425 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 CMBLQ96DG6 245 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 SCGB3A2Q96PL1 93 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 SEC22CQ9BRL7 303 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 BANF2Q9H503 90 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 ELL3Q9HB65 397 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-230ENST00000634433 DLL4Q9NR61 685 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 MGAT4CQ9UBM8 478 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 EIF3KQ9UBQ5 218 aaKnown RBP6.2□□□□□ -1.42
BRCA1-230ENST00000634433 KCNN3Q9UGI6 736 aa6.2□□□□□ -1.42
BRCA1-230ENST00000634433 RALYQ9UKM9 306 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 182.2 ms