RNA–Protein interactions for RNA: ENST00000629427.2

SHPRH-211, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SHPRH, Length 7,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-211ENST00000629427 RIMKLAQ8IXN7 391 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 UFC1Q9Y3C8 167 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 TRAPPC1Q9Y5R8 145 aa10.46□□□□□ -0.73
SHPRH-211ENST00000629427 HYAL3O43820 417 aaPredicted RBP10.46□□□□□ -0.74
SHPRH-211ENST00000629427 BRS3P32247 399 aa10.46□□□□□ -0.74
SHPRH-211ENST00000629427 VAMP3Q15836 100 aa10.46□□□□□ -0.74
SHPRH-211ENST00000629427 C6orf201Q7Z4U5 140 aa10.46□□□□□ -0.74
SHPRH-211ENST00000629427 SP1P08047 785 aa10.46□□□□□ -0.74
SHPRH-211ENST00000629427 MMP7P09237 267 aaPredicted RBP10.46□□□□□ -0.74
SHPRH-211ENST00000629427 TIPARPQ7Z3E1 657 aaKnown RBP10.46□□□□□ -0.74
SHPRH-211ENST00000629427 C10orf90Q96M02 699 aa10.46□□□□□ -0.74
SHPRH-211ENST00000629427 TUBGCP6Q96RT7 1819 aa10.46□□□□□ -0.74
SHPRH-211ENST00000629427 SCN8AQ9UQD0 1980 aa10.46□□□□□ -0.74
SHPRH-211ENST00000629427 COL22A1Q8NFW1 1626 aaPredicted RBP10.46□□□□□ -0.74
SHPRH-211ENST00000629427 LY86O95711 162 aa10.46□□□□□ -0.74
SHPRH-211ENST00000629427 COL9A1P20849 921 aa10.46□□□□□ -0.74
SHPRH-211ENST00000629427 EPHA8P29322 1005 aaPredicted RBP10.46□□□□□ -0.74
SHPRH-211ENST00000629427 SLC37A1P57057 533 aa10.46□□□□□ -0.74
SHPRH-211ENST00000629427 BAP18Q8IXM2 172 aa10.46□□□□□ -0.74
SHPRH-211ENST00000629427 KIAA1958Q8N8K9 716 aa10.46□□□□□ -0.74
SHPRH-211ENST00000629427 AMER3Q8N944 861 aa10.46□□□□□ -0.74
SHPRH-211ENST00000629427 J3KRW8 73 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 PLPP3O14495 311 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 AKR7A2O43488 359 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 ICMTO60725 284 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 USF1P22415 310 aaPredicted RBP10.45□□□□□ -0.74
SHPRH-211ENST00000629427 SRD5A2P31213 254 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 SLC25A1P53007 311 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 FAHD1Q6P587 224 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 C19orf35Q6ZS72 473 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 DYNLRB2Q8TF09 96 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 MRGPRX3Q96LB0 322 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 A0A0B4J2E0 115 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 A0A1B0GX12 115 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 GNG4P50150 75 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 WBP1LQ9NX94 342 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 AMDHD2Q9Y303 409 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 ACP1P24666 158 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 LINC00303Q3SY05 128 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 GPBAR1Q8TDU6 330 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 SAP30LQ9HAJ7 183 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 SIGLEC7Q9Y286 467 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 TP53BP1Q12888 1972 aaPredicted RBP10.45□□□□□ -0.74
SHPRH-211ENST00000629427 TRIM77I1YAP6 450 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 HSBP1O75506 76 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 RD3LP0DJH9 198 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 PMCHP20382 165 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 NUFIP2Q7Z417 695 aaKnown RBP10.45□□□□□ -0.74
SHPRH-211ENST00000629427 NXF2Q9GZY0 626 aaKnown RBP10.45□□□□□ -0.74
SHPRH-211ENST00000629427 OR5V1Q9UGF6 321 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 ARFGEF1Q9Y6D6 1849 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 C3orf85A0A1B0GTC6 90 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 AGFG2O95081 481 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 FPR2P25090 351 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 AVPR2P30518 371 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 KCNJ3P48549 501 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 LSM11P83369 360 aaKnown RBP eCLIP10.45□□□□□ -0.74
SHPRH-211ENST00000629427 SLC16A12Q6ZSM3 486 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 COMMD1Q8N668 190 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 VPS25Q9BRG1 176 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 NEURL1O76050 574 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 CD200P41217 278 aa10.45□□□□□ -0.74
SHPRH-211ENST00000629427 GATCO43716 136 aaKnown RBP10.44□□□□□ -0.74
SHPRH-211ENST00000629427 NKX2-2O95096 273 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 FUCA1P04066 466 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 PGA3P0DJD8 388 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 SPINK2P20155 84 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 MAGEA5P43359 124 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 GALR1P47211 349 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 HOXA4Q00056 320 aaPredicted RBP10.44□□□□□ -0.74
SHPRH-211ENST00000629427 GTF2H5Q6ZYL4 71 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 GPR137Q96N19 417 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 TRAPPC4Q9Y296 219 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 MPZL1O95297 269 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 MIDNQ504T8 468 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 RBPMS2Q6ZRY4 209 aaKnown RBP10.44□□□□□ -0.74
SHPRH-211ENST00000629427 CCDC190Q86UF4 302 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 NOL4LQ96MY1 436 aaPredicted RBP10.44□□□□□ -0.74
SHPRH-211ENST00000629427 LPAR2Q9HBW0 351 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 DNAJB12Q9NXW2 375 aaKnown RBP10.44□□□□□ -0.74
SHPRH-211ENST00000629427 SLC38A11Q08AI6 406 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 SLC25A30Q5SVS4 291 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 DGAT2L7PQ6IED9 249 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 C11orf87Q6NUJ2 197 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 RNASEKQ6P5S7 137 aaKnown RBP10.44□□□□□ -0.74
SHPRH-211ENST00000629427 LINC01555Q8NAE3 123 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 PCOLCE2Q9UKZ9 415 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 TCFL5Q9UL49 500 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 KCNMB2Q9Y691 235 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 A0A1B0GTL3 188 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 NHLH1Q02575 133 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 NHLH2Q02577 135 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 MOB1BQ7L9L4 216 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 C19orf43Q9BQ61 176 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 CRISPLD2Q9H0B8 497 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 TMED3Q9Y3Q3 217 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 PCDHGA9Q9Y5G4 932 aaKnown RBP10.44□□□□□ -0.74
SHPRH-211ENST00000629427 MYPOPQ86VE0 399 aaPredicted RBP10.44□□□□□ -0.74
SHPRH-211ENST00000629427 BMPR1BO00238 502 aa10.44□□□□□ -0.74
SHPRH-211ENST00000629427 BCL2L11O43521 198 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms