RNA–Protein interactions for RNA: ENST00000627620.2

SCN8A-209, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-209ENST00000627620 OR5B21A6NL26 309 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 OR3A1P47881 315 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 PSG6Q00889 435 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 C1QL3Q5VWW1 255 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 ETFRF1Q6IPR1 90 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 OR8B12Q8NGG6 310 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 OR5C1Q8NGR4 320 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 GPR87Q9BY21 358 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 TMPRSS5Q9H3S3 457 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 CACNG5Q9UF02 275 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 DOCK1Q14185 1865 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 A0A1W2PQD3 144 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 SCO1O75880 301 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 MVDP53602 400 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 GUK1Q16774 197 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 VSTM2LQ96N03 204 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 RREB1Q92766 1687 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 IGHA1P01876 353 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 C1QAP02745 245 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 BMI1P35226 326 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 RAB32Q13637 225 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 ZNF561Q8N587 486 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 OR4F17Q8NGA8 305 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 PRRX1P54821 245 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 GGNBP1Q5YKI7 109 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 NEIL1Q96FI4 390 aaPredicted RBP11.35□□□□□ -0.59
SCN8A-209ENST00000627620 GPR137Q96N19 417 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 FLRT3Q9NZU0 649 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 MPC1Q9Y5U8 109 aa11.35□□□□□ -0.59
SCN8A-209ENST00000627620 M0R296 226 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 HOXC8P31273 242 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 KIR2DS2P43631 304 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 PAX5Q02548 391 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 SPINK9Q5DT21 86 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 MESTQ5EB52 335 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 SSX7Q7RTT5 188 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 D2HGDHQ8N465 521 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 LIPT2A6NK58 231 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 IGHV3-13P01766 116 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 IGHV3-7P01780 117 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 ZNF770Q6IQ21 691 aaPredicted RBP11.34□□□□□ -0.59
SCN8A-209ENST00000627620 ATG4DQ86TL0 474 aaPredicted RBP11.34□□□□□ -0.59
SCN8A-209ENST00000627620 ZNF764Q96H86 408 aaPredicted RBP11.34□□□□□ -0.59
SCN8A-209ENST00000627620 OR5AC1P0C628 307 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 MAGEA5P43359 124 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 SUMO1P63165 101 aaKnown RBP11.34□□□□□ -0.59
SCN8A-209ENST00000627620 C3AR1Q16581 482 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 BHLHA15Q7RTS1 189 aaPredicted RBP11.34□□□□□ -0.59
SCN8A-209ENST00000627620 TUSC5Q8IXB3 177 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 COMMD1Q8N668 190 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 GLRX2Q9NS18 164 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 FKBP11Q9NYL4 201 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 FAM24AA6NFZ4 105 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 LY86O95711 162 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 SKP2Q13309 424 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 MRM1Q6IN84 353 aaKnown RBP11.34□□□□□ -0.59
SCN8A-209ENST00000627620 GVQW1Q8N7I0 195 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 SF3B5Q9BWJ5 86 aaKnown RBP11.34□□□□□ -0.59
SCN8A-209ENST00000627620 PECRQ9BY49 303 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 YTHDF2Q9Y5A9 579 aaKnown RBP11.34□□□□□ -0.59
SCN8A-209ENST00000627620 GABRA1P14867 456 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 SPICQ8N5J4 248 aa11.34□□□□□ -0.59
SCN8A-209ENST00000627620 KRTDAPP60985 99 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 OR6S1Q8NH40 331 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 RAB1BQ9H0U4 201 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 SLC25A5P05141 298 aaKnown RBP11.33□□□□□ -0.6
SCN8A-209ENST00000627620 ETV3LQ6ZN32 361 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 WDR61Q9GZS3 305 aaKnown RBP11.33□□□□□ -0.6
SCN8A-209ENST00000627620 KCNK15Q9H427 330 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 ZMIZ1Q9ULJ6 1067 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 AMMECR1Q9Y4X0 333 aaPredicted RBP11.33□□□□□ -0.6
SCN8A-209ENST00000627620 COL18A1P39060 1754 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 A0A1W2PN81 502 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 RAB5AP20339 215 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 CHRNA7P36544 502 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 DMKNQ6E0U4 476 aaPredicted RBP11.33□□□□□ -0.6
SCN8A-209ENST00000627620 PRSS42Q7Z5A4 293 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 SEBOXQ9HB31 216 aaPredicted RBP11.33□□□□□ -0.6
SCN8A-209ENST00000627620 OR6C3Q9NZP0 311 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 MBD1Q9UIS9 605 aaPredicted RBP11.33□□□□□ -0.6
SCN8A-209ENST00000627620 A0A1B0GTQ1 180 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 HRKO00198 91 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 EML2O95834 649 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 CD3EP07766 207 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 UQCC3Q6UW78 93 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 AMDHD2Q9Y303 409 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 LOC102723971A0A1B0GUV8 181 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 OPN1MWP04001 364 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 OPN1MW2P0DN77 364 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 OPN1MW3P0DN78 364 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 SPINK2P20155 84 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 PCMT1P22061 227 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 TIAL1Q01085 375 aaKnown RBP eCLIP11.33□□□□□ -0.6
SCN8A-209ENST00000627620 C11orf42Q8N5U0 333 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 NHLRC2Q8NBF2 726 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 UCK1Q9HA47 277 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 SLC45A2Q9UMX9 530 aa11.33□□□□□ -0.6
SCN8A-209ENST00000627620 SPINT1O43278 529 aa11.32□□□□□ -0.6
SCN8A-209ENST00000627620 KIR2DL1P43626 348 aaPredicted RBP11.32□□□□□ -0.6
SCN8A-209ENST00000627620 RAG2P55895 527 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms