RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 FANCMQ8IYD8 2048 aa1.34□□□□□ -2.19
VBP1-204ENST00000625964 CDK5RAP2Q96SN8 1893 aa1.34□□□□□ -2.19
VBP1-204ENST00000625964 ABCA2Q9BZC7 2435 aa1.34□□□□□ -2.19
VBP1-204ENST00000625964 DOPEY2Q9Y3R5 2298 aa1.34□□□□□ -2.19
VBP1-204ENST00000625964 CACNA1EQ15878 2313 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 CLDN34H7C241 214 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 HUS1O60921 280 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 SCELO95171 688 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 FGFR1OPO95684 399 aaKnown RBP1.34□□□□□ -2.2
VBP1-204ENST00000625964 HBE1P02100 147 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 PGA4P0DJD7 388 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 PGA3P0DJD8 388 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 INAFM2P0DMQ5 153 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 CSRP1P21291 193 aaKnown RBP1.34□□□□□ -2.2
VBP1-204ENST00000625964 MYL9P24844 172 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 GTF2E2P29084 291 aaKnown RBP1.34□□□□□ -2.2
VBP1-204ENST00000625964 RAB9AP51151 201 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 LIPEQ05469 1076 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 GCSAMLQ5JQS6 135 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 TMEM69Q5SWH9 247 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 TMPRSS11AQ6ZMR5 421 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 Q6ZSR6 202 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 TAS2R42Q7RTR8 314 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 BPIFCQ8NFQ6 507 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 CDS1Q92903 461 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 CLDN23Q96B33 292 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 ZNF442Q9H7R0 627 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 MRM3Q9HC36 420 aaKnown RBP1.34□□□□□ -2.2
VBP1-204ENST00000625964 DCAF16Q9NXF7 216 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 ZNF492Q9P255 531 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 RWDD2AQ9UIY3 292 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 YARS2Q9Y2Z4 477 aaKnown RBP1.34□□□□□ -2.2
VBP1-204ENST00000625964 ZNF236Q9UL36 1845 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 SPG11Q96JI7 2443 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 DOCK1Q14185 1865 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 ADGRA3Q8IWK6 1321 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 COL6A6A6NMZ7 2263 aa1.34□□□□□ -2.2
VBP1-204ENST00000625964 MTORP42345 2549 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 A0A1B0GUL6 1792 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 SIP14410 1827 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 GOLGA8OA6NCC3 632 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 PCNX2A6NKB5 2137 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 CENPBD1B2RD01 187 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 C4orf51C9J302 202 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 GOLGA8NF8WBI6 632 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 M0R1X1 148 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 NME4O00746 187 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 PBLDP30039 288 aaPredicted RBP1.33□□□□□ -2.2
VBP1-204ENST00000625964 PCK1P35558 622 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 GGT2P36268 569 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 TGFBR2P37173 567 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 MRPL19P49406 292 aaKnown RBP1.33□□□□□ -2.2
VBP1-204ENST00000625964 MEF2CQ06413 473 aaPredicted RBP1.33□□□□□ -2.2
VBP1-204ENST00000625964 BIKQ13323 160 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 NAB1Q13506 487 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 HORMAD1Q86X24 394 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 DRAM1Q8N682 238 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 LINC00469Q8N7U9 141 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 TTC29Q8NA56 475 aaPredicted RBP1.33□□□□□ -2.2
VBP1-204ENST00000625964 SGTBQ96EQ0 304 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 XPO6Q96QU8 1125 aaKnown RBP1.33□□□□□ -2.2
VBP1-204ENST00000625964 UQCC2Q9BRT2 126 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 PIGUQ9H490 435 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 ACP6Q9NPH0 428 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 DYRK4Q9NR20 520 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 R4GN34 69 aa1.33□□□□□ -2.2
VBP1-204ENST00000625964 USP9YO00507 2555 aaPredicted RBP1.33□□□□□ -2.2
VBP1-204ENST00000625964 DNHD1Q96M86 4753 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 LAMA5O15230 3695 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 F5P12259 2224 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 ITPR2Q14571 2701 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 ZFHX3Q15911 3703 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 ARPC4-TTLL3A0A0A6YYG9 625 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 OR2AG2A6NM03 316 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 M0R3G1 203 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 DEDDO75618 318 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 TCP1P17987 556 aaKnown RBP1.32□□□□□ -2.2
VBP1-204ENST00000625964 PPICP45877 212 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 GZMMP51124 257 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 TNFRSF9Q07011 255 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 PYDC2Q56P42 97 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 ZFAND6Q6FIF0 208 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 SPESP1Q6UW49 350 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 FAM131AQ6UXB0 335 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 LINC00336Q6ZUF6 198 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 DEFB124Q8NES8 71 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 DCAKDQ8WVC6 231 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 ZNF606Q8WXB4 792 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 PKMYT1Q99640 499 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 ZYG11BQ9C0D3 744 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 PRORYQ9H606 182 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 ASF1BQ9NVP2 202 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 CLN6Q9NWW5 311 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 CLN8Q9UBY8 286 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 SPTBN1Q01082 2364 aaKnown RBP1.32□□□□□ -2.2
VBP1-204ENST00000625964 RAD50Q92878 1312 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 LOC400499M0QZD8 3231 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 PTPRSQ13332 1948 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 KNTC1P50748 2209 aa1.32□□□□□ -2.2
VBP1-204ENST00000625964 TLN1Q9Y490 2541 aaKnown RBP1.32□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms