RNA–Protein interactions for RNA: ENST00000623056.3

LDB3-209, Transcript of LIM domain binding 3, humanhuman

TSL 5 BASIC

Gene LDB3, Length 2,314 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-209ENST00000623056 AK3Q9UIJ7 227 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 HSF4Q9ULV5 492 aa12.33□□□□□ -0.44
LDB3-209ENST00000623056 ADAMTS9Q9P2N4 1935 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 LIPT2A6NK58 231 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 SHISA8B8ZZ34 492 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 TSTD3H0UI37 97 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 H3BML4 177 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 SEMA4FO95754 770 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 FCGR2AP12318 317 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 ATP6V0CP27449 155 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 CAPZBP47756 277 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 GLIPR1P48060 266 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 CSNK1A1P48729 337 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 PPM1FP49593 454 aaPredicted RBP12.32□□□□□ -0.44
LDB3-209ENST00000623056 CD81P60033 236 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 SLC16A14Q7RTX9 510 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 CYB561D1Q8N8Q1 229 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 OR13D1Q8NGV5 346 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 BOD1Q96IK1 185 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 CDCA3Q99618 268 aaPredicted RBP12.32□□□□□ -0.44
LDB3-209ENST00000623056 SUCNR1Q9BXA5 334 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 KIAA1456Q9P272 454 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 COPS7AQ9UBW8 275 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 NXT1Q9UKK6 140 aaKnown RBP12.32□□□□□ -0.44
LDB3-209ENST00000623056 TCFL5Q9UL49 500 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 VDAC3Q9Y277 283 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 MYO7BQ6PIF6 2116 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 BTBD17A6NE02 478 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 TRGC1P0CF51 173 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 RRADP55042 308 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 FXYD4P59646 89 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 ICAM4Q14773 271 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 PHLDA2Q53GA4 152 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 FIP1L1Q6UN15 594 aaKnown RBP12.32□□□□□ -0.44
LDB3-209ENST00000623056 PRSS58Q8IYP2 241 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 ZNF441Q8N8Z8 693 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 NOXO1Q8NFA2 376 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 OR8G5Q8NG78 346 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 ST8SIA1Q92185 356 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 DDIT4LQ96D03 193 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 LYZL4Q96KX0 146 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 TGIF2Q9GZN2 237 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 VN1R1Q9GZP7 353 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 ZNF700Q9H0M5 742 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 CLEC1BQ9P126 229 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 HS3ST3A1Q9Y663 406 aa12.32□□□□□ -0.44
LDB3-209ENST00000623056 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 IGHV5-51A0A0C4DH38 117 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 ANKUB1A6NFN9 424 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 ZNF850A8MQ14 1090 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 SCAF4O95104 1147 aaKnown RBP12.31□□□□□ -0.44
LDB3-209ENST00000623056 PGA4P0DJD7 388 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 PGA3P0DJD8 388 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 GFERP55789 205 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 NSDHLQ15738 373 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 RAB30Q15771 203 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 HIST2H3PS2Q5TEC6 136 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 CDCP2Q5VXM1 449 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 OR10AD1Q8NGE0 317 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 OR5L1Q8NGL2 311 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 RNASE11Q8TAA1 199 aaKnown RBP12.31□□□□□ -0.44
LDB3-209ENST00000623056 ABHD5Q8WTS1 349 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 FRZBQ92765 325 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 MSI2Q96DH6 328 aaKnown RBP12.31□□□□□ -0.44
LDB3-209ENST00000623056 NECAP2Q9NVZ3 263 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 ALKBH4Q9NXW9 302 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 B3GALT1Q9Y5Z6 326 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 SLCO1B1Q9Y6L6 691 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 COL5A1P20908 1838 aaPredicted RBP12.31□□□□□ -0.44
LDB3-209ENST00000623056 A0A1W2PNV4 684 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 FAM24AA6NFZ4 105 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 SFTPDP35247 375 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 FOXF1Q12946 379 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 EIF3IQ13347 325 aaKnown RBP12.31□□□□□ -0.44
LDB3-209ENST00000623056 FZD2Q14332 565 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 ZNF266Q14584 549 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 GNMTQ14749 295 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 CARD17Q5XLA6 110 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 C16orf47Q6ZP98 133 aaPredicted RBP12.31□□□□□ -0.44
LDB3-209ENST00000623056 FBXL14Q8N1E6 418 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 OR4D5Q8NGN0 318 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 OR1N1Q8NGS0 311 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 PIGTQ969N2 578 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 NIPSNAP3BQ9BS92 247 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 SLC2A9Q9NRM0 540 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 SDHAF3Q9NRP4 125 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 FOXD3Q9UJU5 478 aaPredicted RBP12.31□□□□□ -0.44
LDB3-209ENST00000623056 WSB1Q9Y6I7 421 aa12.31□□□□□ -0.44
LDB3-209ENST00000623056 IGSF23A1L1A6 192 aa12.3□□□□□ -0.44
LDB3-209ENST00000623056 ATXN7O15265 892 aaPredicted RBP12.3□□□□□ -0.44
LDB3-209ENST00000623056 IGHG1P01857 330 aa12.3□□□□□ -0.44
LDB3-209ENST00000623056 HSPB1P04792 205 aaKnown RBP12.3□□□□□ -0.44
LDB3-209ENST00000623056 DBHP09172 617 aa12.3□□□□□ -0.44
LDB3-209ENST00000623056 FAHP16930 419 aa12.3□□□□□ -0.44
LDB3-209ENST00000623056 OPRM1P35372 400 aa12.3□□□□□ -0.44
LDB3-209ENST00000623056 SMAD4Q13485 552 aaKnown RBP12.3□□□□□ -0.44
LDB3-209ENST00000623056 SSX2Q16385 188 aa12.3□□□□□ -0.44
LDB3-209ENST00000623056 LGI3Q8N145 548 aa12.3□□□□□ -0.44
LDB3-209ENST00000623056 OR2C3Q8N628 320 aa12.3□□□□□ -0.44
LDB3-209ENST00000623056 OR14L1PQ8NHC6 308 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms