RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 NHLRC3Q5JS37 347 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 PLAC9Q5JTB6 97 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 TRIQKQ629K1 86 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 STEAP3Q658P3 488 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 Q6ZTK2 550 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 MOGAT3Q86VF5 341 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 LYSMD2Q8IV50 215 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 Q8IYB0 196 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 MUC15Q8N387 334 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 OR52I2Q8NH67 350 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 LRRC29Q8WV35 223 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 YIPF5Q969M3 257 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 FBXW5Q969U6 566 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 RAB3CQ96E17 227 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 CYYR1Q96J86 154 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 ZMAT3Q9HA38 289 aaKnown RBP9.01□□□□□ -0.97
CPNE3-212ENST00000621783 FN3KRPQ9HA64 309 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 RHOFQ9HBH0 211 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 ZNF581Q9P0T4 197 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 ST3GAL6Q9Y274 331 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 KALRNO60229 2985 aa9.01□□□□□ -0.97
CPNE3-212ENST00000621783 MEIOCA2RUB1 952 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 CLEC18AA5D8T8 446 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 HS3ST1O14792 307 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 LANCL1O43813 399 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 NOS1APO75052 506 aaPredicted RBP9□□□□□ -0.97
CPNE3-212ENST00000621783 NXPH2O95156 264 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 ACAA1P09110 424 aaPredicted RBP9□□□□□ -0.97
CPNE3-212ENST00000621783 GSTP1P09211 210 aaKnown RBP9□□□□□ -0.97
CPNE3-212ENST00000621783 GNB3P16520 340 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 EGR1P18146 543 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 CHATP28329 748 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 PMELP40967 661 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 TMEM50BP56557 158 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 GMFBP60983 142 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 SNRPD2P62316 118 aaKnown RBP9□□□□□ -0.97
CPNE3-212ENST00000621783 HOXA4Q00056 320 aaPredicted RBP9□□□□□ -0.97
CPNE3-212ENST00000621783 IL13RA2Q14627 380 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 SWI5Q1ZZU3 235 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 MPV17LQ2QL34 196 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 FAM209AQ5JX71 171 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 NKAPLQ5M9Q1 402 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 OLFML2AQ68BL7 652 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 SIGIRRQ6IA17 410 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 CLEC18BQ6UXF7 455 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 FAM58AQ8N1B3 248 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 CLEC18CQ8NCF0 446 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 OR10Z1Q8NGY1 313 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 ARHGAP5-AS1Q96IT6 56 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 THAP7Q9BT49 309 aaPredicted RBP9□□□□□ -0.97
CPNE3-212ENST00000621783 PECRQ9BY49 303 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 HES4Q9HCC6 221 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9□□□□□ -0.97
CPNE3-212ENST00000621783 ELF5Q9UKW6 265 aaPredicted RBP9□□□□□ -0.97
CPNE3-212ENST00000621783 NBASA2RRP1 2371 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 EPG5Q9HCE0 2579 aa9□□□□□ -0.97
CPNE3-212ENST00000621783 RELNP78509 3460 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 CADP27708 2225 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 MEIS3P1A6NDR6 274 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FAM90A10PA6NDY2 464 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FAM90A18PA6NE21 464 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FAM90A16PA6NEW6 464 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FAM90A20PA6NIJ5 464 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FAM90A8PA6NJQ4 464 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FAM90A7PA6NKC0 464 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FAM90A22PA8MWA6 464 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FAM90A12PA8MX19 464 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FAM90A5PA8MXJ8 464 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FAM90A23PA8MXZ1 464 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 SULT1C2O00338 296 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 WNT9BO14905 357 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 TPD52L2O43399 206 aaKnown RBP8.99□□□□□ -0.97
CPNE3-212ENST00000621783 PDCD6O75340 191 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 GOSR1O95249 250 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 MELTFP08582 738 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FAM90A15PP0C7V4 464 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FAM90A13PP0C7W8 464 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FAM90A14PP0C7W9 464 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FAM90A24PP0C7X0 464 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 GLRA1P23415 457 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 PRSS3P35030 304 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 RBMXP38159 391 aaKnown RBP8.99□□□□□ -0.97
CPNE3-212ENST00000621783 CCL8P80075 99 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 IKZF1Q13422 519 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 PDCD1Q15116 288 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 CDNFQ49AH0 187 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 ACP7Q6ZNF0 438 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 DNM1P46Q6ZS02 220 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 C6orf201Q7Z4U5 140 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 LINC00596Q86U02 117 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 ZCCHC24Q8N2G6 241 aaKnown RBP8.99□□□□□ -0.97
CPNE3-212ENST00000621783 GPX8Q8TED1 209 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 NUDCD2Q8WVJ2 157 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 FCAMRQ8WWV6 532 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 ST8SIA4Q92187 359 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 POM121Q96HA1 1249 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 SPOCK3Q9BQ16 436 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 MS4A5Q9H3V2 200 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 SCPEP1Q9HB40 452 aa8.99□□□□□ -0.97
CPNE3-212ENST00000621783 GCM1Q9NP62 436 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms