RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 TET2Q6N021 2002 aaPredicted RBP6.47□□□□□ -1.37
CLK1-215ENST00000621181 IGHV1-69DA0A0B4J2H0 117 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 PRSS37A4D1T9 235 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 ANKRD34BA5PLL1 514 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 C5orf63A6NC05 138 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 PIN1P1O15428 100 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 OGG1O15527 345 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 SLC16A7O60669 478 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 IGHV1-69P01742 117 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 EIF4EP06730 217 aaKnown RBP6.47□□□□□ -1.37
CLK1-215ENST00000621181 MMP9P14780 707 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 BTCP35070 178 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 PMELP40967 661 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 LSM6P62312 80 aaKnown RBP6.47□□□□□ -1.37
CLK1-215ENST00000621181 POU4F2Q12837 409 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 MAB21L1Q13394 359 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 MADCAM1Q13477 382 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 OR8B8Q15620 311 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 MESTQ5EB52 335 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 CEP78Q5JTW2 689 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 LAMTOR1Q6IAA8 161 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 DHRS7BQ6IAN0 325 aaPredicted RBP6.47□□□□□ -1.37
CLK1-215ENST00000621181 MZT2BQ6NZ67 158 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 GLB1L2Q8IW92 636 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 PDZD9Q8IXQ8 264 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 YIPF7Q8N8F6 280 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 BOLLQ8N9W6 283 aaKnown RBP6.47□□□□□ -1.37
CLK1-215ENST00000621181 ZSCAN4Q8NAM6 433 aaPredicted RBP6.47□□□□□ -1.37
CLK1-215ENST00000621181 OR4M1Q8NGD0 313 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 ENKURQ8TC29 256 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 ZFAND1Q8TCF1 268 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 ERGIC1Q969X5 290 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 Q96M85 177 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 NDEL1Q9GZM8 345 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 SYT4Q9H2B2 425 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 SLA2Q9H6Q3 261 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 KRCC1Q9NPI7 259 aaPredicted RBP6.47□□□□□ -1.37
CLK1-215ENST00000621181 H2AFY2Q9P0M6 372 aaPredicted RBP6.47□□□□□ -1.37
CLK1-215ENST00000621181 CTSZQ9UBR2 303 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 ATPIF1Q9UII2 106 aa6.47□□□□□ -1.37
CLK1-215ENST00000621181 A0A0U1RQK1 487 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 G3V4G9 280 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 ADAM20O43506 726 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 PAHP00439 452 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 CD1AP06126 327 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 CD14P08571 375 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 CLUP10909 449 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 OR10A3P58181 314 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 HOXA4Q00056 320 aaPredicted RBP6.46□□□□□ -1.37
CLK1-215ENST00000621181 CRMP1Q14194 572 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 GPR176Q14439 515 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 TRAM1Q15629 374 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 MPPED2Q15777 294 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 FAM27D1Q5T7N8 215 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 PRAMEF6Q5VXH4 476 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 TRIQKQ629K1 86 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 PLET1Q6UQ28 207 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 Q6ZSV7 163 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 SSX6Q7RTT6 188 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.46□□□□□ -1.37
CLK1-215ENST00000621181 TPRA1Q86W33 373 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 LDLRAD3Q86YD5 345 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 GJC3Q8NFK1 279 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 OR52L1Q8NGH7 329 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 Q8TCH9 128 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 RPS4Y2Q8TD47 263 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 CREB3L1Q96BA8 519 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 ABHD1Q96SE0 405 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 HDHD2Q9H0R4 259 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 TRIM36Q9NQ86 728 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 NLKQ9UBE8 527 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 ADAM30Q9UKF2 790 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 BAIAP2Q9UQB8 552 aa6.46□□□□□ -1.37
CLK1-215ENST00000621181 COA3Q9Y2R0 106 aaPredicted RBP6.46□□□□□ -1.37
CLK1-215ENST00000621181 NBEAL2Q6ZNJ1 2754 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 TRAV1-2A0A0B4J238 106 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 DAPL1A0PJW8 107 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 C7orf66A4D0T2 115 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 ANKRD61A6NGH8 418 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 PRR23D1E9PI22 279 aaPredicted RBP6.46□□□□□ -1.38
CLK1-215ENST00000621181 KHDRBS3O75525 346 aaKnown RBP6.46□□□□□ -1.38
CLK1-215ENST00000621181 C1QBP02746 253 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 PRB2P02812 416 aaPredicted RBP6.46□□□□□ -1.38
CLK1-215ENST00000621181 PRR23D2P0DMB1 279 aaPredicted RBP6.46□□□□□ -1.38
CLK1-215ENST00000621181 ARSBP15848 533 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 ERP29P30040 261 aaKnown RBP6.46□□□□□ -1.38
CLK1-215ENST00000621181 CENPAP49450 140 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 OR12D2P58182 307 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 RPS11P62280 158 aaKnown RBP eCLIP6.46□□□□□ -1.38
CLK1-215ENST00000621181 ARF6P62330 175 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 CD83Q01151 205 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 EGR3Q06889 387 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 MALLQ13021 153 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 IL18Q14116 193 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 OR8G1Q15617 311 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 FAM189A2Q15884 450 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 IDNKQ5T6J7 187 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 SFXN4Q6P4A7 337 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 UNQ9370/PRO34162Q6UXP9 181 aa6.46□□□□□ -1.38
CLK1-215ENST00000621181 FAM122BQ7Z309 247 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms