RNA–Protein interactions for RNA: ENST00000619644.4

SMTN-223, Transcript of smoothelin, human

TSL 2 BASIC

Gene SMTN, Length 3,227 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMTN-223	ENST00000619644	EXOSC5	Q9NQT4	235 aa	Known RBP eCLIP	12.65	□□□□□ -0.38
SMTN-223	ENST00000619644	C10orf142	B7Z368	130 aa		12.65	□□□□□ -0.38
SMTN-223	ENST00000619644	MSR1	P21757	451 aa		12.65	□□□□□ -0.38
SMTN-223	ENST00000619644	RPS10	P46783	165 aa	Known RBP	12.65	□□□□□ -0.38
SMTN-223	ENST00000619644	CDX1	P47902	265 aa	Predicted RBP	12.65	□□□□□ -0.38
SMTN-223	ENST00000619644	FHIT	P49789	147 aa		12.65	□□□□□ -0.38
SMTN-223	ENST00000619644	ZNF529	Q6P280	563 aa		12.65	□□□□□ -0.38
SMTN-223	ENST00000619644	DTX1	Q86Y01	620 aa		12.65	□□□□□ -0.38
SMTN-223	ENST00000619644	GTF3A	Q92664	365 aa	Known RBP	12.65	□□□□□ -0.38
SMTN-223	ENST00000619644	C14orf144	Q96I85	54 aa		12.65	□□□□□ -0.38
SMTN-223	ENST00000619644	CNTNAP3	Q9BZ76	1288 aa		12.65	□□□□□ -0.38
SMTN-223	ENST00000619644	CHST5	Q9GZS9	411 aa		12.65	□□□□□ -0.38
SMTN-223	ENST00000619644	PNRC2	Q9NPJ4	139 aa	Known RBP	12.65	□□□□□ -0.38
SMTN-223	ENST00000619644	FAM212B	Q9NTI7	297 aa	Predicted RBP	12.65	□□□□□ -0.38
SMTN-223	ENST00000619644		M0R135	149 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	ZNHIT1	O43257	154 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	SRF	P11831	508 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	PI4KA	P42356	2102 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	RPS23	P62266	143 aa	Known RBP	12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	FAM3A	P98173	230 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	FAM189A2	Q15884	450 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	GJC3	Q8NFK1	279 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	SPACA9	Q96E40	222 aa	Predicted RBP	12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	ZNF837	Q96EG3	531 aa	Predicted RBP	12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	ZNF799	Q96GE5	643 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	PADI1	Q9ULC6	663 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	OSGIN2	Q9Y236	505 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	FBXO7	Q9Y3I1	522 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	OR2C1	O95371	312 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	OR5H8	P0DN80	308 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	RPS2	P15880	293 aa	Known RBP	12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	MSX1	P28360	303 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	CEBPG	P53567	150 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	NDUFA6	P56556	154 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	OPN5	Q6U736	354 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	HEPN1	Q6WQI6	88 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	OR5L1	Q8NGL2	311 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	ULBP2	Q9BZM5	246 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	KCNJ16	Q9NPI9	418 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	GAR1	Q9NY12	217 aa	Known RBP	12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	HDGFL3	Q9Y3E1	203 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	NPIPB13	A6NJU9	1138 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	NPIPB4	C9JG80	1138 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	OR13C7	P0DN81	318 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	PIGP	P57054	158 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	GGNBP1	Q5YKI7	109 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	SSX9	Q7RTT3	188 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	COMMD1	Q8N668	190 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	ERGIC1	Q969X5	290 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	PIGQ	Q9BRB3	760 aa		12.64	□□□□□ -0.39
SMTN-223	ENST00000619644	DHRS3	O75911	302 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	LCAT	P04180	440 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	PTGDS	P41222	190 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	CAMLG	P49069	296 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	SNAI3	Q3KNW1	292 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	MEX3B	Q6ZN04	569 aa	Known RBP	12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	HSD17B11	Q8NBQ5	300 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	PRDM13	Q9H4Q3	707 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	CCDC163	A0A0D9SF12	145 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	SLC35A1	P78382	337 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	CCL7	P80098	99 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	RABEPK	Q7Z6M1	372 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	TMEM156	Q8N614	296 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	GFOD1	Q9NXC2	390 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	DKKL1	Q9UK85	242 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	ANAPC10	Q9UM13	185 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	MMP24	Q9Y5R2	645 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	SHANK1	Q9Y566	2161 aa		12.63	□□□□□ -0.39
SMTN-223	ENST00000619644	C1QL1	O75973	258 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	RAB1A	P62820	205 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	HIST2H3A	Q71DI3	136 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	S100PBP	Q96BU1	408 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	YPEL4	Q96NS1	127 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	SLC35B3	Q9H1N7	401 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	DOK5	Q9P104	306 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	FBLN5	Q9UBX5	448 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	PUS1	Q9Y606	427 aa	Known RBP eCLIP	12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	WDFY4	Q6ZS81	3184 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	AQP7P3	A6NL99	342 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644		H7C1Q1	480 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	TP53I11	O14683	189 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	DEDD	O75618	318 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	DANCR	P0C864	163 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	MAS1L	P35410	378 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	UCP2	P55851	309 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	LHFPL1	Q86WI0	220 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	UBAC2	Q8NBM4	344 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	CADM4	Q8NFZ8	388 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	PRRX2	Q99811	253 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	NUDT16L1	Q9BRJ7	211 aa	Known RBP	12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	NELFA	Q9H3P2	528 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	LUZP4	Q9P127	313 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	KCNIP3	Q9Y2W7	256 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	TNFSF11	O14788	317 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	RPUSD3	Q6P087	351 aa	Known RBP	12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	WDR74	Q6RFH5	385 aa	Predicted RBP	12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	DMRTC2	Q8IXT2	367 aa	Predicted RBP	12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	OR10D4P	Q8NGN7	298 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	MR1	Q95460	341 aa		12.62	□□□□□ -0.39
SMTN-223	ENST00000619644	BSCL2	Q96G97	398 aa	Predicted RBP	12.62	□□□□□ -0.39

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms