RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 DNAAF1Q8NEP3 725 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 OR4S1Q8NGB4 309 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 OR4M1Q8NGD0 313 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 OR8J1Q8NGP2 316 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 C17orf50Q8WW18 174 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 RORBQ92753 470 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 PPP1R14AQ96A00 147 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 BORCS8Q96FH0 119 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 ZNF714Q96N38 554 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 IL4I1Q96RQ9 567 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 NEK6Q9HC98 313 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 TCF19Q9Y242 345 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 MINOS1-NBL1R4GNA1 71 aa9.66□□□□□ -0.86
UPF3B-204ENST00000619445 FAM230AA0A1W2PPH8 454 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 FUOMA2VDF0 154 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 ODF3BA8MYP8 253 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 ZNF737O75373 536 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 PEX14O75381 377 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 ATP5HO75947 161 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 RPP14O95059 124 aaKnown RBP9.65□□□□□ -0.86
UPF3B-204ENST00000619445 ARG1P05089 322 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 CCL3L1P16619 93 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 AZGP1P25311 298 aaKnown RBP9.65□□□□□ -0.86
UPF3B-204ENST00000619445 PEX2P28328 305 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 RBP2P50120 134 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 BMXP51813 675 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 ARHGDIBP52566 201 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 ATP1B3P54709 279 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 DLX6P56179 175 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 EDDM3BP56851 147 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 COL10A1Q03692 680 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 IL18R1Q13478 541 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 ZNF273Q14593 569 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 DMRTC1Q5HYR2 192 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 KCTD20Q7Z5Y7 419 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 CATSPERDQ86XM0 798 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 ANGPTL5Q86XS5 388 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 Q8N2B8 174 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 PRSS22Q9GZN4 317 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.65□□□□□ -0.86
UPF3B-204ENST00000619445 AP4S1Q9Y587 144 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 PCDHGB5Q9Y5G0 923 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 LINC00312Q9Y6C7 94 aa9.65□□□□□ -0.86
UPF3B-204ENST00000619445 DYNC1I1O14576 645 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 FBXO24O75426 580 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 IGHV1-8P0DP01 117 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 VSIG10L2P0DP72 767 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 PIPP12273 146 aaPredicted RBP9.64□□□□□ -0.87
UPF3B-204ENST00000619445 PRKACBP22694 351 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 CEBPDP49716 269 aaPredicted RBP9.64□□□□□ -0.87
UPF3B-204ENST00000619445 CDC42P60953 191 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 ACTC1P68032 377 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 ACTA1P68133 377 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 FAM189A2Q15884 450 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 SPIN3Q5JUX0 258 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 TMEM244Q5VVB8 128 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 ZNF782Q6ZMW2 699 aaPredicted RBP9.64□□□□□ -0.87
UPF3B-204ENST00000619445 EGFL6Q8IUX8 553 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 OR10H4Q8NGA5 316 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 OR4F17Q8NGA8 305 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 TRMT10AQ8TBZ6 339 aaKnown RBP9.64□□□□□ -0.87
UPF3B-204ENST00000619445 PIFOQ8TCI5 191 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 TRUB1Q8WWH5 349 aaKnown RBP9.64□□□□□ -0.87
UPF3B-204ENST00000619445 MRPL48Q96GC5 212 aaKnown RBP9.64□□□□□ -0.87
UPF3B-204ENST00000619445 AKR1E2Q96JD6 320 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 OR4F4Q96R69 305 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 NKX3-1Q99801 234 aaPredicted RBP9.64□□□□□ -0.87
UPF3B-204ENST00000619445 CADM1Q9BY67 442 aaKnown RBP9.64□□□□□ -0.87
UPF3B-204ENST00000619445 RHOFQ9HBH0 211 aa9.64□□□□□ -0.87
UPF3B-204ENST00000619445 PRKDCP78527 4128 aaKnown RBP9.64□□□□□ -0.87
UPF3B-204ENST00000619445 TRBV2A0A0J9YWF9 115 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 A0A1W2PQL4 384 aaPredicted RBP9.63□□□□□ -0.87
UPF3B-204ENST00000619445 MEGF11A6BM72 1044 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 SNTNA6NMZ2 147 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 F2RL2O00254 374 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 MGST3O14880 152 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 CHST1O43916 411 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 MITFO75030 526 aaPredicted RBP9.63□□□□□ -0.87
UPF3B-204ENST00000619445 ERP29P30040 261 aaKnown RBP9.63□□□□□ -0.87
UPF3B-204ENST00000619445 DYNC1I2Q13409 638 aaKnown RBP9.63□□□□□ -0.87
UPF3B-204ENST00000619445 ZNF146Q15072 292 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 UBE2V2Q15819 145 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 SSX2Q16385 188 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 ARSJQ5FYB0 599 aaPredicted RBP9.63□□□□□ -0.87
UPF3B-204ENST00000619445 KPRPQ5T749 579 aaPredicted RBP9.63□□□□□ -0.87
UPF3B-204ENST00000619445 OR52W1Q6IF63 320 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 SLC25A26Q70HW3 274 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 UTS2BQ765I0 119 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 C16orf82Q7Z2V1 217 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 BCDIN3DQ7Z5W3 292 aaKnown RBP9.63□□□□□ -0.87
UPF3B-204ENST00000619445 NDUFA11Q86Y39 141 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 EMG1Q92979 244 aaKnown RBP9.63□□□□□ -0.87
UPF3B-204ENST00000619445 CREB3L1Q96BA8 519 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 SPSB1Q96BD6 273 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 CENPNQ96H22 339 aaPredicted RBP9.63□□□□□ -0.87
UPF3B-204ENST00000619445 GABARAPL3Q9BY60 117 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 MTCH1Q9NZJ7 389 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 SIGLEC9Q9Y336 463 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 SESN1Q9Y6P5 492 aa9.63□□□□□ -0.87
UPF3B-204ENST00000619445 LOC107986453A0A1B0GWG9 222 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms