RNA–Protein interactions for RNA: ENST00000618534.4

NEK3-208, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene NEK3, Length 2,414 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-208ENST00000618534 OR5L1Q8NGL2 311 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 GALNT14Q96FL9 552 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 AKIRIN1Q9H9L7 192 aaPredicted RBP17.74■□□□□ 0.43
NEK3-208ENST00000618534 RARRES3Q9UL19 164 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 MED19A0JLT2 244 aaPredicted RBP17.74■□□□□ 0.43
NEK3-208ENST00000618534 S100A6P06703 90 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 CELA2AP08217 269 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 FKBP2P26885 142 aaKnown RBP17.74■□□□□ 0.43
NEK3-208ENST00000618534 KRBOX4Q5JUW0 171 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 HPSE2Q8WWQ2 592 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 C19orf12Q9NSK7 152 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 HSF4Q9ULV5 492 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 CNTRLQ7Z7A1 2325 aa17.74■□□□□ 0.43
NEK3-208ENST00000618534 H7C1Q1 480 aa17.73■□□□□ 0.43
NEK3-208ENST00000618534 UBE2CO00762 179 aa17.73■□□□□ 0.43
NEK3-208ENST00000618534 BCAT2O15382 392 aaPredicted RBP17.73■□□□□ 0.43
NEK3-208ENST00000618534 AGAP20933 346 aa17.73■□□□□ 0.43
NEK3-208ENST00000618534 DTYMKP23919 212 aa17.73■□□□□ 0.43
NEK3-208ENST00000618534 CHATP28329 748 aa17.73■□□□□ 0.43
NEK3-208ENST00000618534 C18orf12Q96KH6 178 aa17.73■□□□□ 0.43
NEK3-208ENST00000618534 ULBP2Q9BZM5 246 aa17.73■□□□□ 0.43
NEK3-208ENST00000618534 SLC2A9Q9NRM0 540 aa17.73■□□□□ 0.43
NEK3-208ENST00000618534 CCDC187A0A096LP49 1063 aa17.73■□□□□ 0.43
NEK3-208ENST00000618534 TOX3O15405 576 aaPredicted RBP17.73■□□□□ 0.43
NEK3-208ENST00000618534 AFF3P51826 1226 aaKnown RBP17.73■□□□□ 0.43
NEK3-208ENST00000618534 SLC22A25Q6T423 547 aa17.73■□□□□ 0.43
NEK3-208ENST00000618534 LIAT1Q6ZQX7 453 aa17.73■□□□□ 0.43
NEK3-208ENST00000618534 HSD17B11Q8NBQ5 300 aa17.73■□□□□ 0.43
NEK3-208ENST00000618534 SPSB1Q96BD6 273 aa17.73■□□□□ 0.43
NEK3-208ENST00000618534 TP53I11O14683 189 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 PRH1P02810 166 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 NHLH2Q02577 135 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 PIGYQ3MUY2 71 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 CDCP2Q5VXM1 449 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 RAET1LQ5VY80 246 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 ZNF561Q8N587 486 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 OR11L1Q8NGX0 322 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 GNRHR2Q96P88 292 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 SUCNR1Q9BXA5 334 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 C19orf25Q9UFG5 118 aaPredicted RBP17.72■□□□□ 0.43
NEK3-208ENST00000618534 hCG_1809904A0A1W2PP81 198 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 A0A1W2PR64 198 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 A0A1W2PRV1 198 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 UMAD1C9J7I0 102 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 GEMIN2O14893 280 aaKnown RBP17.72■□□□□ 0.43
NEK3-208ENST00000618534 SGCEO43556 437 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 SMIM6P0DI80 62 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 GPR157Q5UAW9 335 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 FBXW12Q6X9E4 464 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 LRTM2Q8N967 370 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 CCDC54Q8NEL0 328 aa17.72■□□□□ 0.43
NEK3-208ENST00000618534 FOXD3Q9UJU5 478 aaPredicted RBP17.72■□□□□ 0.43
NEK3-208ENST00000618534 A0A1B0GV50 99 aa17.71■□□□□ 0.43
NEK3-208ENST00000618534 G3V3Y1 287 aa17.71■□□□□ 0.43
NEK3-208ENST00000618534 ZNF806P0C7X5 589 aa17.71■□□□□ 0.43
NEK3-208ENST00000618534 CRYGSP22914 178 aa17.71■□□□□ 0.43
NEK3-208ENST00000618534 SUCLG1P53597 346 aaKnown RBP17.71■□□□□ 0.43
NEK3-208ENST00000618534 GUSBP11Q6P575 273 aa17.71■□□□□ 0.43
NEK3-208ENST00000618534 MAML2Q8IZL2 1156 aaPredicted RBP17.71■□□□□ 0.43
NEK3-208ENST00000618534 KDF1Q8NAX2 398 aaPredicted RBP17.71■□□□□ 0.43
NEK3-208ENST00000618534 OR10AD1Q8NGE0 317 aa17.71■□□□□ 0.43
NEK3-208ENST00000618534 MSI2Q96DH6 328 aaKnown RBP17.71■□□□□ 0.43
NEK3-208ENST00000618534 FBXO7Q9Y3I1 522 aa17.71■□□□□ 0.43
NEK3-208ENST00000618534 S100A8P05109 93 aa17.71■□□□□ 0.43
NEK3-208ENST00000618534 ZNF14P17017 642 aaPredicted RBP17.71■□□□□ 0.43
NEK3-208ENST00000618534 DUSP1P28562 367 aa17.71■□□□□ 0.43
NEK3-208ENST00000618534 PPP1R3BQ86XI6 285 aa17.71■□□□□ 0.43
NEK3-208ENST00000618534 ZIC4Q8N9L1 334 aa17.71■□□□□ 0.43
NEK3-208ENST00000618534 TAAR9Q96RI9 348 aa17.71■□□□□ 0.43
NEK3-208ENST00000618534 TUBA4BQ9H853 241 aa17.71■□□□□ 0.43
NEK3-208ENST00000618534 RCL1Q9Y2P8 373 aaKnown RBP17.71■□□□□ 0.43
NEK3-208ENST00000618534 NSG1A0A0A6YYJ2 146 aa17.7■□□□□ 0.42
NEK3-208ENST00000618534 IGKV1-12A0A0C4DH73 117 aa17.7■□□□□ 0.42
NEK3-208ENST00000618534 A0A1W2PQM1 296 aa17.7■□□□□ 0.42
NEK3-208ENST00000618534 IGKV1D-12P01611 117 aa17.7■□□□□ 0.42
NEK3-208ENST00000618534 GLP1RP43220 463 aa17.7■□□□□ 0.42
NEK3-208ENST00000618534 A0A087WZY1 265 aa17.7■□□□□ 0.42
NEK3-208ENST00000618534 EIF1BO60739 113 aaKnown RBP17.7■□□□□ 0.42
NEK3-208ENST00000618534 ARG1P05089 322 aa17.7■□□□□ 0.42
NEK3-208ENST00000618534 RAB5AP20339 215 aa17.7■□□□□ 0.42
NEK3-208ENST00000618534 LMO1P25800 156 aa17.7■□□□□ 0.42
NEK3-208ENST00000618534 PPP1CCP36873 323 aaKnown RBP17.7■□□□□ 0.42
NEK3-208ENST00000618534 ASCL1P50553 236 aa17.7■□□□□ 0.42
NEK3-208ENST00000618534 NOVA1P51513 510 aaKnown RBP17.7■□□□□ 0.42
NEK3-208ENST00000618534 FABP9Q0Z7S8 132 aa17.7■□□□□ 0.42
NEK3-208ENST00000618534 IL13RA2Q14627 380 aa17.7■□□□□ 0.42
NEK3-208ENST00000618534 CNN3Q15417 329 aaKnown RBP17.7■□□□□ 0.42
NEK3-208ENST00000618534 ZNF774Q6NX45 483 aa17.7■□□□□ 0.42
NEK3-208ENST00000618534 TERTO14746 1132 aaKnown RBP17.69■□□□□ 0.42
NEK3-208ENST00000618534 ST8SIA3O43173 380 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 CCL3P10147 92 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 FAM27BQ5VT28 67 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 TMEM182Q6ZP80 229 aaPredicted RBP17.69■□□□□ 0.42
NEK3-208ENST00000618534 LGI3Q8N145 548 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 FAM24BQ8N5W8 94 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 CD300LFQ8TDQ1 290 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 BORCS8Q96FH0 119 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 ANGPTL4Q9BY76 406 aa17.69■□□□□ 0.42
NEK3-208ENST00000618534 STRAPQ9Y3F4 350 aaKnown RBP17.69■□□□□ 0.42
NEK3-208ENST00000618534 SHANK1Q9Y566 2161 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms