RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 NPEPL1Q8NDH3 523 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 CA5BP1Q8WTZ4 195 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 THOC3Q96J01 351 aaKnown RBP9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 MANBALQ9NQG1 85 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 VAX2Q9UIW0 290 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 COL22A1Q8NFW1 1626 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 BMPR1BO00238 502 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 TNFSF11O14788 317 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 RPLP1P05386 114 aaKnown RBP9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 RPL13AP40429 203 aaKnown RBP9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 LPAR6P43657 344 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 DYNLT3P51808 116 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 C17orf78Q8N4C9 275 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 SPACA9Q96E40 222 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 ATP5SQ99766 215 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 TMEM147Q9BVK8 224 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 GSX1Q9H4S2 264 aaPredicted RBP9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 MSL2Q9HCI7 577 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 ZMIZ1Q9ULJ6 1067 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 MRPS2Q9Y399 296 aaKnown RBP9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 GOLT1BQ9Y3E0 138 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 CDK2AP1O14519 115 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 ZNF253O75346 499 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 FAM157BP0CG42 384 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 RHOBP62745 196 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 NHLH1Q02575 133 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 NHLH2Q02577 135 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 ISXQ2M1V0 245 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 STUMQ69YW2 141 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 BTNL3Q6UXE8 466 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 KMT5CQ86Y97 462 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 PUSL1Q8N0Z8 303 aaKnown RBP9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 DEFB108BQ8NET1 73 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 PECRQ9BY49 303 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 SMDT1Q9H4I9 107 aa9.48□□□□□ -0.89
CLTCL1-209ENST00000617103 ALG1L2C9J202 215 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 H3BMH7 237 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 CTSVO60911 334 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 VDAC1P21796 283 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 RBPJQ06330 500 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 GUCA2BQ16661 112 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 LRP11Q86VZ4 500 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 HLA-CQ95604 372 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 ALG14Q96F25 216 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 ACY3Q96HD9 319 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 BOD1Q96IK1 185 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 OR2A5Q96R48 311 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 PRR13Q9NZ81 148 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 FAM74A7A6NL05 159 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 ZNF718Q3SXZ3 478 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 LINC00518Q8N0U6 118 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 OR10G8Q8NGN5 311 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 PHIPQ8WWQ0 1821 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 OR10C1Q96KK4 312 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 MRGPRX1Q96LB2 322 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 WDR61Q9GZS3 305 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 GEMIN2O14893 280 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 F2RP25116 425 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 ELOBQ15370 118 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 OR10V1Q8NGI7 309 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 FBLIM1Q8WUP2 373 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 ADAT1Q9BUB4 502 aaKnown RBP9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 TIMM9Q9Y5J7 89 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 TRAV8-7A0A075B6U6 113 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 M0R1X1 148 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 SYNGR2O43760 224 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 F12P00748 615 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 HEXAP06865 529 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 CEACAM6P40199 344 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 GNB1P62873 340 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 FAM74A3Q4VXF1 159 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 ZNF660Q6AZW8 331 aaPredicted RBP9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 DPPA3Q6W0C5 159 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 ETV3LQ6ZN32 361 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 OR5AU1Q8NGC0 362 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 OR2V1Q8NHB1 315 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 HES4Q9HCC6 221 aa9.47□□□□□ -0.89
CLTCL1-209ENST00000617103 PCM1Q15154 2024 aa9.46□□□□□ -0.89
CLTCL1-209ENST00000617103 MFSD2BA6NFX1 497 aa9.46□□□□□ -0.89
CLTCL1-209ENST00000617103 PLPP3O14495 311 aa9.46□□□□□ -0.89
CLTCL1-209ENST00000617103 SOCS1O15524 211 aa9.46□□□□□ -0.89
CLTCL1-209ENST00000617103 CCR2P41597 374 aa9.46□□□□□ -0.89
CLTCL1-209ENST00000617103 METAP1P53582 386 aa9.46□□□□□ -0.89
CLTCL1-209ENST00000617103 MPV17LQ2QL34 196 aa9.46□□□□□ -0.89
CLTCL1-209ENST00000617103 ACSM6Q6P461 480 aa9.46□□□□□ -0.89
CLTCL1-209ENST00000617103 OIT3Q8WWZ8 545 aa9.46□□□□□ -0.89
CLTCL1-209ENST00000617103 BCL2L2Q92843 193 aaPredicted RBP9.46□□□□□ -0.89
CLTCL1-209ENST00000617103 MENTQ9BUN1 341 aa9.46□□□□□ -0.89
CLTCL1-209ENST00000617103 WDR13Q9H1Z4 485 aa9.46□□□□□ -0.89
CLTCL1-209ENST00000617103 IL17BQ9UHF5 180 aa9.46□□□□□ -0.89
CLTCL1-209ENST00000617103 FUT9Q9Y231 359 aa9.46□□□□□ -0.89
CLTCL1-209ENST00000617103 A0A1B0GTQ1 180 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 PMS2P1A4D2B8 440 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 LILRA5A6NI73 299 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 NGFP01138 241 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 CRYAAP02489 173 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 DSCR4P56555 118 aaPredicted RBP9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 MLF2Q15773 248 aaPredicted RBP9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 ZIC1Q15915 447 aa9.46□□□□□ -0.9
CLTCL1-209ENST00000617103 IGFBP7Q16270 282 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms