RNA–Protein interactions for RNA: ENST00000617054.1

NEK3-207, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 3,256 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-207ENST00000617054 COPZ2Q9P299 210 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 RABL2AQ9UBK7 228 aaPredicted RBP6.67□□□□□ -1.34
NEK3-207ENST00000617054 EIF3KQ9UBQ5 218 aaKnown RBP6.67□□□□□ -1.34
NEK3-207ENST00000617054 RABL2BQ9UNT1 228 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 CACNA1DQ01668 2161 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 OR2AT4A6NND4 320 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 DHRS7CA6NNS2 312 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 MELTFP08582 738 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 CALCRP30988 508 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 FAUP35544 74 aaKnown RBP6.67□□□□□ -1.34
NEK3-207ENST00000617054 DAZAP2Q15038 168 aaPredicted RBP6.67□□□□□ -1.34
NEK3-207ENST00000617054 RBMS2Q15434 407 aaKnown RBP6.67□□□□□ -1.34
NEK3-207ENST00000617054 CEACAM21Q3KPI0 293 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 RNASE10Q5GAN6 216 aaKnown RBP6.67□□□□□ -1.34
NEK3-207ENST00000617054 C1orf185Q5T7R7 199 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 LIN54Q6MZP7 749 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 CDH26Q8IXH8 852 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 OSR2Q8N2R0 312 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 TMEM229BQ8NBD8 167 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 FN3KRPQ9HA64 309 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 MSL2Q9HCI7 577 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 PRR13Q9NZ81 148 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 ZNF391Q9UJN7 358 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 PLEKHA6Q9Y2H5 1048 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 PKD1L2Q7Z442 2459 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 A0A0A6YYH2 397 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 PQLC2LA1A4F0 135 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 C7orf66A4D0T2 115 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 NAP1L6A6NFF2 107 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 A6NJ64 397 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 FOXI3A8MTJ6 420 aaPredicted RBP6.67□□□□□ -1.34
NEK3-207ENST00000617054 ALX3O95076 343 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 TFF1P04155 84 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 GRPP07492 148 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 UBBP0CG47 229 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 GLI4P10075 376 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 COX5AP20674 150 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 CPT2P23786 658 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 ALDH3B1P43353 468 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 NPY4RP50391 375 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 BHLHA15Q7RTS1 189 aaPredicted RBP6.67□□□□□ -1.34
NEK3-207ENST00000617054 ADAD2Q8NCV1 583 aaKnown RBP6.67□□□□□ -1.34
NEK3-207ENST00000617054 GRPEL2Q8TAA5 225 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 KLF14Q8TD94 323 aaPredicted RBP6.67□□□□□ -1.34
NEK3-207ENST00000617054 HIST1H2AAQ96QV6 131 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 SCPEP1Q9HB40 452 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 FBLN5Q9UBX5 448 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 AK3Q9UIJ7 227 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 VSIG4Q9Y279 399 aa6.67□□□□□ -1.34
NEK3-207ENST00000617054 IGHV1-18A0A0C4DH31 117 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 MEX3AA1L020 520 aaKnown RBP6.66□□□□□ -1.34
NEK3-207ENST00000617054 ANKRD30BLA7E2S9 258 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 M0R1B8 84 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 SULT1C2O00338 296 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 HS3ST1O14792 307 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 AKR7A2O43488 359 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 TDGF1P3P51864 188 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 CAPZA1P52907 286 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 TSPAN5P62079 268 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 MRPS15P82914 257 aaKnown RBP6.66□□□□□ -1.34
NEK3-207ENST00000617054 ZNF324BQ6AW86 544 aaPredicted RBP6.66□□□□□ -1.34
NEK3-207ENST00000617054 RPUSD3Q6P087 351 aaKnown RBP6.66□□□□□ -1.34
NEK3-207ENST00000617054 GLDNQ6ZMI3 551 aaPredicted RBP6.66□□□□□ -1.34
NEK3-207ENST00000617054 WDR86Q86TI4 376 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 MUC20Q8N307 709 aaPredicted RBP6.66□□□□□ -1.34
NEK3-207ENST00000617054 CSNK2A3Q8NEV1 391 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 STEAP2Q8NFT2 490 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 FAM57AQ8TBR7 257 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 MARCH1Q8TCQ1 289 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 ATPIF1Q9UII2 106 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 DUSP13Q9UII6 198 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 VPS13CQ709C8 3753 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 SPTBN1Q01082 2364 aaKnown RBP6.66□□□□□ -1.34
NEK3-207ENST00000617054 A0A0G2JNJ9 132 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 CDIPTO14735 213 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 IGKV3-15P01624 115 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 IFNA6P05013 189 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 AKR1C4P17516 323 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 AMY2BP19961 511 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 ZNF826PQ6ZT77 177 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 LRP11Q86VZ4 500 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 OR11H4Q8NGC9 324 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 OR5P3Q8WZ94 311 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 GTF3AQ92664 365 aaKnown RBP6.66□□□□□ -1.34
NEK3-207ENST00000617054 Q9UFV3 132 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 ACACBO00763 2458 aa6.66□□□□□ -1.34
NEK3-207ENST00000617054 OR5H1A6NKK0 313 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 CD74P04233 296 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 CBR1P16152 277 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 MSMPQ1L6U9 139 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 KRTCAP3Q53RY4 240 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 ATPAF1Q5TC12 328 aaPredicted RBP6.65□□□□□ -1.34
NEK3-207ENST00000617054 Q6ZPA2 131 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 SLC36A1Q7Z2H8 476 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 NOXA1Q86UR1 476 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 OR5L1Q8NGL2 311 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 ST8SIA4Q92187 359 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 ZNF486Q96H40 463 aaPredicted RBP6.65□□□□□ -1.34
NEK3-207ENST00000617054 TM2D1Q9BX74 207 aa6.65□□□□□ -1.34
NEK3-207ENST00000617054 ACTR6Q9GZN1 396 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms