RNA–Protein interactions for RNA: ENST00000616710.4

TNFRSF11A-205, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-205ENST00000616710 PEBP1P30086 187 aaKnown RBP12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 FAM3BP58499 235 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 MRGPRFQ96AM1 343 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 ZNF845Q96IR2 970 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 LINC00615Q96LM1 132 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 KLHDC3Q9BQ90 382 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 KCNS2Q9ULS6 477 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SELENOKQ9Y6D0 94 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 ARHGEF17Q96PE2 2063 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SPINK4O60575 86 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 P2RY1P47900 373 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SLC25A1P53007 311 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SCAND1P57086 179 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SUPT4H1P63272 117 aaKnown RBP12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 ZNF92Q03936 586 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 ZNF154Q13106 437 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 MCEMP1Q8IX19 187 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 OR2C3Q8N628 320 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 MYOTQ9UBF9 498 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 TNS1Q9HBL0 1735 aaKnown RBP12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 UTS2O95399 124 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 DUSP1P28562 367 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 BIDP55957 195 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 PMP22Q01453 160 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 GPM6BQ13491 265 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 LBHQ53QV2 105 aaPredicted RBP12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 C1orf140Q5VVS0 124 aa12.37□□□□□ -0.43
TNFRSF11A-205ENST00000616710 A0A1B0GWJ7 208 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 PRAMEF26H0Y7S4 382 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 MYOGP15173 224 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 TMEM267Q0VDI3 215 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 PLAC9Q5JTB6 97 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 RTBDNQ9BSG5 229 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 CALHM2Q9HA72 323 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 DNAJC4Q9NNZ3 241 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SLC39A9Q9NUM3 307 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SLC45A1Q9Y2W3 748 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 HTTP42858 3142 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 CTSBP07858 339 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 DBHP09172 617 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 IAPPP10997 89 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 PGCP20142 388 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 GALR1P47211 349 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 OR1D4P47884 311 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 OR4X1Q8NH49 305 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 MENTQ9BUN1 341 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 KLRF1Q9NZS2 232 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SEMA5BQ9P283 1151 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 FOXD3Q9UJU5 478 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 A0A1B0GUS0 222 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 MARCH11A6NNE9 402 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 CDC14BO60729 498 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 OR7C1O76099 320 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 INSM1Q01101 510 aaPredicted RBP12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 EWSR1Q01844 656 aaKnown RBP eCLIP12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 OR51H1Q8NH63 302 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 GPBAR1Q8TDU6 330 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 V9GYS6 101 aa12.36□□□□□ -0.43
TNFRSF11A-205ENST00000616710 TLX3O43711 291 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 NKX2-2O95096 273 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 FAHP16930 419 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 DYNLT3P51808 116 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 OR8G2PQ6IF36 304 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SRPK3Q9UPE1 567 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 ZNF407Q9C0G0 2248 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 GRIFINA4D1Z8 144 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 FIGNL2A6NMB9 653 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SPRY1O43609 319 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 BPNT1O95861 308 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 CEACAM1P13688 526 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 MTCP1P56278 107 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 CST6Q15828 149 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 VAMP3Q15836 100 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SYT13Q7L8C5 426 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 OR4F5Q8NH21 305 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 IL1F10Q8WWZ1 152 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 OR4F4Q96R69 305 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 ATP5SQ99766 215 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 LPAR5Q9H1C0 372 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 ZNF160Q9HCG1 818 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 OSGIN2Q9Y236 505 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 IGKV1D-42A0A075B6H8 117 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 LDLRAD4O15165 306 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 DLEU1O43261 78 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 DDAH2O95865 285 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 HBE1P02100 147 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 CD55P08174 381 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 GLIPR1P48060 266 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 DEFB103AP81534 67 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 JOSD1Q15040 202 aaPredicted RBP12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 ASPHD2Q6ICH7 369 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 CATSPERDQ86XM0 798 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 LHX4Q969G2 390 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 RSG1Q9BU20 258 aa12.35□□□□□ -0.43
TNFRSF11A-205ENST00000616710 H3BMH7 237 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 CD1AP06126 327 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SERPINE2P07093 398 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 SLC35E2P0CK97 266 aa12.34□□□□□ -0.43
TNFRSF11A-205ENST00000616710 CSF2RAP15509 400 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms