RNA–Protein interactions for RNA: ENST00000616390.1

CACNA1C-231, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 2 BASIC

Gene CACNA1C, Length 2,833 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-231ENST00000616390 OR51F2Q8NH61 342 aa12.1□□□□□ -0.47
CACNA1C-231ENST00000616390 PP6455Q8WZ26 134 aa12.1□□□□□ -0.47
CACNA1C-231ENST00000616390 TOMM40LQ969M1 308 aa12.1□□□□□ -0.47
CACNA1C-231ENST00000616390 SH2D2AQ9NP31 389 aa12.1□□□□□ -0.47
CACNA1C-231ENST00000616390 RASL12Q9NYN1 266 aa12.1□□□□□ -0.47
CACNA1C-231ENST00000616390 OR5AC2Q9NZP5 309 aa12.1□□□□□ -0.47
CACNA1C-231ENST00000616390 MIOXQ9UGB7 285 aa12.1□□□□□ -0.47
CACNA1C-231ENST00000616390 LOXL2Q9Y4K0 774 aa12.1□□□□□ -0.47
CACNA1C-231ENST00000616390 H0YIZ8 118 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 SCAF4O95104 1147 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 SFT2D2O95562 160 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 CPT2P23786 658 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 SNTB1Q13884 538 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 HABP2Q14520 560 aaPredicted RBP12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 SWI5Q1ZZU3 235 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 VAX1Q5SQQ9 334 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 FAHD2BQ6P2I3 314 aaPredicted RBP12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 SLC16A14Q7RTX9 510 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 GGNQ86UU5 652 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 OR5AP2Q8NGF4 316 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 CT55Q8WUE5 264 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 MRPS24Q96EL2 167 aaKnown RBP12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 FAHD2AQ96GK7 314 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 GUCD1Q96NT3 240 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 SLC25A32Q9H2D1 315 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 ASF1BQ9NVP2 202 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 BDP1A6H8Y1 2624 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 IGKV1-27A0A075B6S5 117 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 MSGN1A6NI15 193 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 GJE1A6NN92 205 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 TRA2AQ13595 282 aaKnown RBP eCLIP12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 SLC23A3Q6PIS1 610 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 ATRAIDQ6UW56 229 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 FAM89BQ8N5H3 189 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 ZSCAN4Q8NAM6 433 aaPredicted RBP12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 CLRN3Q8NCR9 226 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 OR1F12Q8NHA8 337 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 FAM216AQ8WUB2 273 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 PIGCQ92535 297 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 RNF126Q9BV68 326 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 C19orf12Q9NSK7 152 aa12.09□□□□□ -0.47
CACNA1C-231ENST00000616390 KRBOX1C9JBD0 128 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 ABCD4O14678 606 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 IGLV3-1P01715 115 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 CCL2P13500 99 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 SRD5A2P31213 254 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 CLDN15P56746 228 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 MRPS34P82930 218 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 PSG4Q00888 419 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 DEFA6Q01524 100 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 RAB32Q13637 225 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 ZNF345Q14585 488 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 PIGYQ3MUY2 71 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 BORCS8Q96FH0 119 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 THOC3Q96J01 351 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 HES7Q9BYE0 225 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 TREM1Q9NP99 234 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 NIT2Q9NQR4 276 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 A0A096LPE4 126 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 A0A1W2PPZ6 126 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 ZNF850A8MQ14 1090 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 SYNGR3O43761 229 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 TDGF1P13385 188 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 HLA-GP17693 338 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 FPR2P25090 351 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 CYB561P49447 251 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 TAS2R46P59540 309 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 FXYD4P59646 89 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 SRSF4Q08170 494 aaKnown RBP12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 RIPPLY1Q0D2K3 151 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 ACTBL2Q562R1 376 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 OR1S2Q8NGQ3 325 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 TMED6Q8WW62 240 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 FOXB1Q99853 325 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 TMEM38BQ9NVV0 291 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 P4HTMQ9NXG6 502 aa12.08□□□□□ -0.48
CACNA1C-231ENST00000616390 TEX13DA0A0J9YY54 714 aaPredicted RBP12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 MEX3AA1L020 520 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 OTX1P32242 354 aaPredicted RBP12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 FAM189A2Q15884 450 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 WNT2BQ93097 391 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 METTL9Q9H1A3 318 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 GLS2Q9UI32 602 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 C14orf166Q9Y224 244 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 GEMIN2O14893 280 aaKnown RBP12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 MED6O75586 246 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 CYC1P08574 325 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 CELA3AP09093 270 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 JMJD7P0C870 316 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 CNR1P21554 472 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 HIST1H3AP68431 136 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 ZNF92Q03936 586 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 RAB35Q15286 201 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 SP6Q3SY56 376 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 HIST2H3PS2Q5TEC6 136 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 C6orf15Q6UXA7 325 aaPredicted RBP12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 MOB3CQ70IA8 216 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 HIST2H3AQ71DI3 136 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 OVCH2Q7RTZ1 564 aa12.07□□□□□ -0.48
CACNA1C-231ENST00000616390 SKA3Q8IX90 412 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms