RNA–Protein interactions for RNA: ENST00000616325.1

PCDHA11-202, Transcript of protocadherin alpha 11, humanhuman

APPRIS ALT2 BASIC

Gene PCDHA11, Length 3,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-202ENST00000616325 LRRC18Q8N456 261 aa11.77□□□□□ -0.52
PCDHA11-202ENST00000616325 DAZLQ92904 295 aaKnown RBP11.77□□□□□ -0.52
PCDHA11-202ENST00000616325 DDA1Q9BW61 102 aa11.77□□□□□ -0.52
PCDHA11-202ENST00000616325 MRPL37Q9BZE1 423 aaKnown RBP11.77□□□□□ -0.52
PCDHA11-202ENST00000616325 PBOV1Q9GZY1 135 aa11.77□□□□□ -0.52
PCDHA11-202ENST00000616325 OR5H8P0DN80 308 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 APOBEC1P41238 236 aaKnown RBP11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 CAPZBP47756 277 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 RPL29P47914 159 aaKnown RBP11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 RUNX1Q01196 453 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 PDCD1Q15116 288 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 C1QL4Q86Z23 238 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 MRPL41Q8IXM3 137 aaKnown RBP11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 OR2AJ1Q8NGZ0 328 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 STT3BQ8TCJ2 826 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 GPR84Q9NQS5 396 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 G3V3Y1 287 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 BPNT1O95861 308 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 SCGB1D1O95968 90 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 CLPSP04118 112 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 EFNA3P52797 238 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 CLRN1P58418 232 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 ZNF705AQ6ZN79 300 aaPredicted RBP11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 TMEM37Q8WXS4 190 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 EMG1Q92979 244 aaKnown RBP11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 PIGTQ969N2 578 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 TVP23CQ96ET8 276 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 URM1Q9BTM9 101 aaKnown RBP11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 CABLES2Q9BTV7 478 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 CFHR5Q9BXR6 569 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 C8orf33Q9H7E9 229 aaPredicted RBP11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 G6PC2Q9NQR9 355 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 OBP2AQ9NY56 170 aa11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 DIDO1Q9BTC0 2240 aaKnown RBP11.77□□□□□ -0.53
PCDHA11-202ENST00000616325 A6NNC1 897 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 E5RGE8 158 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 ZNHIT1O43257 154 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 SEC11BP0C7V7 166 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 TBPP20226 339 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 LBX1P52954 281 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 YPEL5P62699 121 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 PRAMEF20Q5VT98 475 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 C6orf201Q7Z4U5 140 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 OR52M1Q8NGK5 317 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 NSG2Q9Y328 171 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 CACNA1DQ01668 2161 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 LOC390937A0A1W2PQ73 354 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 CDC14BO60729 498 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 TTRP02766 147 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 GAPDHP04406 335 aaKnown RBP11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 OR5AC1P0C628 307 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 FBLP22087 321 aaKnown RBP11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 SLC6A8P48029 635 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 IDH3GP51553 393 aaPredicted RBP11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 NUTF2P61970 127 aaKnown RBP11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 HSF1Q00613 529 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 TNFRSF9Q07011 255 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 GNMTQ14749 295 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 FNDC7Q5VTL7 733 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 COMMD1Q8N668 190 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 KCNG3Q8TAE7 436 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 C2orf88Q9BSF0 95 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 GPR87Q9BY21 358 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 WWTR1Q9GZV5 400 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 OR10A2Q9H208 303 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 LRFN1Q9P244 771 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 KLHL13Q9P2N7 655 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 IGKV1D-8A0A087WSZ0 117 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 CCDC187A0A096LP49 1063 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 CHRM2P08172 466 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 FUT3P21217 361 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 TMEM176BQ3YBM2 270 aaPredicted RBP11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 SLC22A25Q6T423 547 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 C20orf196Q8IYI0 205 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 C1orf87Q8N0U7 546 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 NEU1Q99519 415 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 SLC25A31Q9H0C2 315 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 PLEKHA2Q9HB19 425 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 PLEKHJ1Q9NW61 149 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 DMDP11532 3685 aa11.76□□□□□ -0.53
PCDHA11-202ENST00000616325 FIGNL2A6NMB9 653 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 FTCDNL1E5RQL4 147 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 DDAH2O95865 285 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 SPINK2P20155 84 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 BLKP51451 505 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 FOXF1Q12946 379 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 SHHQ15465 462 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 ZNF721Q8TF20 911 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 SCRT1Q9BWW7 348 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 ADAM19Q9H013 955 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 NSG1A0A0A6YYJ2 146 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 CCDC85CA6NKD9 419 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 A8MWP6 167 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 EDN3P14138 238 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 P2RY1P47900 373 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 PCK2Q16822 640 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 C1QL2Q7Z5L3 287 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 THNSL2Q86YJ6 484 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 ZNF519Q8TB69 540 aa11.75□□□□□ -0.53
PCDHA11-202ENST00000616325 GPHA2Q96T91 129 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms