RNA–Protein interactions for RNA: ENST00000612795.1

CSNK1E-215, Transcript of casein kinase 1 epsilon, human

TSL 2

Gene CSNK1E, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1E-215	ENST00000612795	OR3A4P	P47883	348 aa		13.64	□□□□□ -0.23
CSNK1E-215	ENST00000612795	LUM	P51884	338 aa	Predicted RBP	13.64	□□□□□ -0.23
CSNK1E-215	ENST00000612795	HMGA2	P52926	109 aa		13.64	□□□□□ -0.23
CSNK1E-215	ENST00000612795	ESRRG	P62508	458 aa		13.64	□□□□□ -0.23
CSNK1E-215	ENST00000612795	CLVS2	Q5SYC1	327 aa		13.64	□□□□□ -0.23
CSNK1E-215	ENST00000612795	TRAPPC6B	Q86SZ2	158 aa		13.64	□□□□□ -0.23
CSNK1E-215	ENST00000612795	IQCF1	Q8N6M8	205 aa		13.64	□□□□□ -0.23
CSNK1E-215	ENST00000612795	TPRX1	Q8N7U7	411 aa		13.64	□□□□□ -0.23
CSNK1E-215	ENST00000612795	ZNF596	Q8TC21	504 aa		13.64	□□□□□ -0.23
CSNK1E-215	ENST00000612795	P2RX4	Q99571	388 aa		13.64	□□□□□ -0.23
CSNK1E-215	ENST00000612795	PBOV1	Q9GZY1	135 aa		13.64	□□□□□ -0.23
CSNK1E-215	ENST00000612795	HUWE1	Q7Z6Z7	4374 aa	Known RBP	13.64	□□□□□ -0.23
CSNK1E-215	ENST00000612795	PQLC2L	A1A4F0	135 aa		13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	ACOD1	A6NK06	481 aa		13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	ARPC2	O15144	300 aa		13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	DHRS3	O75911	302 aa		13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	MPZ	P25189	248 aa		13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	ERVK11-1	P61568	191 aa		13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	PPP1R8	Q12972	351 aa	Known RBP	13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	CHPT1	Q8WUD6	406 aa		13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	SNX22	Q96L94	193 aa		13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	DUX3	Q96PT4	197 aa		13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	TEAD3	Q99594	435 aa		13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	ZFP57	Q9NU63	452 aa		13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	GAR1	Q9NY12	217 aa	Known RBP	13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	MOB4	Q9Y3A3	225 aa		13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	HSPE1-MOB4	S4R3N1	261 aa		13.63	□□□□□ -0.23
CSNK1E-215	ENST00000612795	LCE6A	A0A183	80 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	LEUTX	A8MZ59	168 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	PRR23D1	E9PI22	279 aa	Predicted RBP	13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795		H3BN98	237 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	PRR23D2	P0DMB1	279 aa	Predicted RBP	13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	PEX2	P28328	305 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	CEACAM3	P40198	252 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	ECI1	P42126	302 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	RPS7	P62081	194 aa	Known RBP	13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	GRK1	Q15835	563 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	C9orf66	Q5T8R8	295 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	ABHD12	Q8N2K0	398 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	CMTM5	Q96DZ9	223 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	DGCR6L	Q9BY27	220 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	MRO	Q9BYG7	248 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	PKIB	Q9C010	78 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	CHST6	Q9GZX3	395 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	GTF2A1L	Q9UNN4	478 aa		13.62	□□□□□ -0.23
CSNK1E-215	ENST00000612795	LYST	Q99698	3801 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	TMEM82	A0PJX8	343 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	FAM172BP	A6NC97	362 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	DLGAP1	O14490	977 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	PRODH	O43272	600 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	IGLV3-1	P01715	115 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	LYL1	P12980	280 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	HSD17B1	P14061	328 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	GABRR1	P24046	479 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	MNDA	P41218	407 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	SLC35B1	P78383	322 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	BDH1	Q02338	343 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	IL24	Q13007	206 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	ZNF829	Q3KNS6	432 aa	Predicted RBP	13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	PRAMEF5	Q5TYX0	476 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	SLX4IP	Q5VYV7	408 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	OR52W1	Q6IF63	320 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	RTN4RL2	Q86UN3	420 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	ANGPTL5	Q86XS5	388 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	ZNF695	Q8IW36	515 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	TRMT10A	Q8TBZ6	339 aa	Known RBP	13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	CEP19	Q96LK0	163 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	NOL4L	Q96MY1	436 aa	Predicted RBP	13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	RCHY1	Q96PM5	261 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	CDRT15	Q96T59	188 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	NUFIP1	Q9UHK0	495 aa	Known RBP	13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795		U3KQV3	271 aa		13.61	□□□□□ -0.23
CSNK1E-215	ENST00000612795	SERPINE3	A8MV23	424 aa		13.6	□□□□□ -0.23
CSNK1E-215	ENST00000612795	MMP23A	O75900	390 aa		13.6	□□□□□ -0.23
CSNK1E-215	ENST00000612795	ALOX5AP	P20292	161 aa		13.6	□□□□□ -0.23
CSNK1E-215	ENST00000612795	CHAT	P28329	748 aa		13.6	□□□□□ -0.23
CSNK1E-215	ENST00000612795	TMEM42	Q69YG0	159 aa		13.6	□□□□□ -0.23
CSNK1E-215	ENST00000612795	DEGS2	Q6QHC5	323 aa		13.6	□□□□□ -0.23
CSNK1E-215	ENST00000612795	HDX	Q7Z353	690 aa		13.6	□□□□□ -0.23
CSNK1E-215	ENST00000612795	OR5M8	Q8NGP6	311 aa		13.6	□□□□□ -0.23
CSNK1E-215	ENST00000612795	CREB3L1	Q96BA8	519 aa		13.6	□□□□□ -0.23
CSNK1E-215	ENST00000612795	DNAJB9	Q9UBS3	223 aa		13.6	□□□□□ -0.23
CSNK1E-215	ENST00000612795	HHLA2	Q9UM44	414 aa		13.6	□□□□□ -0.23
CSNK1E-215	ENST00000612795	DNAH1	Q9P2D7	4330 aa		13.6	□□□□□ -0.23
CSNK1E-215	ENST00000612795	FAM230A	A0A1W2PPH8	454 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	ARRDC5	A6NEK1	342 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795		A6NIN4	97 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	CCL24	O00175	119 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	INMT	O95050	263 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	HAND1	O96004	215 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	IGHA1	P01876	353 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	HCCS	P53701	268 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	MFGE8	Q08431	387 aa	Predicted RBP	13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	MICA	Q29983	383 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	TPTE2P1	Q5T6R2	138 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	CCDC144NL	Q6NUI1	221 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	BAIAP2L2	Q6UXY1	529 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	COMMD1	Q8N668	190 aa		13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	EMG1	Q92979	244 aa	Known RBP	13.59	□□□□□ -0.23
CSNK1E-215	ENST00000612795	SLAMF9	Q96A28	289 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms