RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 SHBQ15464 509 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 P4HA3Q7Z4N8 544 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 FAM89BQ8N5H3 189 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 CADM4Q8NFZ8 388 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 FGFBP3Q8TAT2 258 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 SMIM8Q96KF7 97 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 METTL9Q9H1A3 318 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 A0A1W2PPE2 198 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 PRF1P14222 555 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 ZNF14P17017 642 aaPredicted RBP12.23□□□□□ -0.45
COL6A1-207ENST00000612273 IGSF11Q5DX21 431 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 SLC23A3Q6PIS1 610 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 MYPOPQ86VE0 399 aaPredicted RBP12.23□□□□□ -0.45
COL6A1-207ENST00000612273 OR14L1PQ8NHC6 308 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 SPTSSAQ969W0 71 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 TGIF2Q9GZN2 237 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 ZNF700Q9H0M5 742 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 URGCP-MRPS24S4R325 110 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 KIAA2026Q5HYC2 2103 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 ADAMTS9Q9P2N4 1935 aa12.23□□□□□ -0.45
COL6A1-207ENST00000612273 FAM24AA6NFZ4 105 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 NPIPB13A6NJU9 1138 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 NPIPB4C9JG80 1138 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 DEDDO75618 318 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 CST7O76096 145 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 FCGR3AP08637 254 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 NAT2P11245 290 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 PPP1CCP36873 323 aaKnown RBP12.22□□□□□ -0.45
COL6A1-207ENST00000612273 TLE1Q04724 770 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 OR6S1Q8NH40 331 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 PAPOLGQ9BWT3 736 aaKnown RBP12.22□□□□□ -0.45
COL6A1-207ENST00000612273 FBLN5Q9UBX5 448 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 HDGFL3Q9Y3E1 203 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 A0A096LPE4 126 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 IGKV1-12A0A0C4DH73 117 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 A0A1W2PPZ6 126 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 CXCL13O43927 109 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 IGKV1D-12P01611 117 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 THBS4P35443 961 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 NPBWR2P48146 333 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 SULT1A2P50226 295 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 EIF5AP63241 154 aaKnown RBP12.22□□□□□ -0.45
COL6A1-207ENST00000612273 IGFBP7Q16270 282 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 MAML2Q8IZL2 1156 aaPredicted RBP12.22□□□□□ -0.45
COL6A1-207ENST00000612273 OR10AD1Q8NGE0 317 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 UBALD1Q8TB05 177 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 SLC2A9Q9NRM0 540 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 C7orf77A4D0Y5 90 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 H3BP45 60 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 JTBO76095 146 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 RGS19P49795 217 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 ZNF84P51523 738 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 GUK1Q16774 197 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 PLCXD3Q63HM9 321 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 VASH2Q86V25 355 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 ZFP62Q8NB50 900 aaPredicted RBP12.22□□□□□ -0.45
COL6A1-207ENST00000612273 RARRES2Q99969 163 aa12.22□□□□□ -0.45
COL6A1-207ENST00000612273 COLCA2A8K830 154 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 CD63P08962 238 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 POLR2GP62487 172 aaKnown RBP eCLIP12.21□□□□□ -0.45
COL6A1-207ENST00000612273 TMEM268Q5VZI3 342 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 SLC25A26Q70HW3 274 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 NABP1Q96AH0 204 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 Q96M66 194 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 PHF7Q9BWX1 381 aaPredicted RBP12.21□□□□□ -0.45
COL6A1-207ENST00000612273 C19orf25Q9UFG5 118 aaPredicted RBP12.21□□□□□ -0.45
COL6A1-207ENST00000612273 IGLV3-12A0A075B6K2 115 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 PATE3B3GLJ2 98 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 NQO2P16083 231 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 HOXA1P49639 335 aaPredicted RBP12.21□□□□□ -0.45
COL6A1-207ENST00000612273 RBP2P50120 134 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 MEOX2P50222 304 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 RAB5BP61020 215 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 IL15RAQ13261 267 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 BTNL8Q6UX41 500 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 PP6455Q8WZ26 134 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 SMCO4Q9NRQ5 59 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 DNAJB11Q9UBS4 358 aa12.21□□□□□ -0.45
COL6A1-207ENST00000612273 CRYM-AS1A6NIL9 109 aa12.21□□□□□ -0.46
COL6A1-207ENST00000612273 C1orf196B1AJZ1 125 aa12.21□□□□□ -0.46
COL6A1-207ENST00000612273 UMAD1C9J7I0 102 aa12.21□□□□□ -0.46
COL6A1-207ENST00000612273 NRASP01111 189 aa12.21□□□□□ -0.46
COL6A1-207ENST00000612273 FBP1P09467 338 aa12.21□□□□□ -0.46
COL6A1-207ENST00000612273 OTX2P32243 289 aa12.21□□□□□ -0.46
COL6A1-207ENST00000612273 EIF1P41567 113 aaKnown RBP12.21□□□□□ -0.46
COL6A1-207ENST00000612273 DVL1P1P54792 670 aaPredicted RBP12.21□□□□□ -0.46
COL6A1-207ENST00000612273 HERV-K104P61576 105 aa12.21□□□□□ -0.46
COL6A1-207ENST00000612273 LPAL2Q16609 132 aa12.21□□□□□ -0.46
COL6A1-207ENST00000612273 SAT2Q96F10 170 aaPredicted RBP12.21□□□□□ -0.46
COL6A1-207ENST00000612273 FAM212BQ9NTI7 297 aaPredicted RBP12.21□□□□□ -0.46
COL6A1-207ENST00000612273 NECAP2Q9NVZ3 263 aa12.21□□□□□ -0.46
COL6A1-207ENST00000612273 IL36RNQ9UBH0 155 aa12.21□□□□□ -0.46
COL6A1-207ENST00000612273 ZIC3O60481 467 aa12.2□□□□□ -0.46
COL6A1-207ENST00000612273 EPHA1P21709 976 aa12.2□□□□□ -0.46
COL6A1-207ENST00000612273 CCL1P22362 96 aa12.2□□□□□ -0.46
COL6A1-207ENST00000612273 ZNF92Q03936 586 aa12.2□□□□□ -0.46
COL6A1-207ENST00000612273 HABP2Q14520 560 aaPredicted RBP12.2□□□□□ -0.46
COL6A1-207ENST00000612273 HAGHQ16775 308 aa12.2□□□□□ -0.46
COL6A1-207ENST00000612273 IZUMO4Q1ZYL8 232 aa12.2□□□□□ -0.46
COL6A1-207ENST00000612273 CEACAM16Q2WEN9 425 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms