RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 SLC35G3Q8N808 338 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 OR4F5Q8NH21 305 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 OR10D3Q8NH80 312 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 OR4F4Q96R69 305 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 IFT22Q9H7X7 185 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 NPDC1Q9NQX5 325 aaPredicted RBP10.96□□□□□ -0.65
CDH1-212ENST00000611625 MMP24Q9Y5R2 645 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 CLEC18AA5D8T8 446 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 GNG3P63215 75 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 SSX2Q16385 188 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 C1orf100Q5SVJ3 147 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 FAM219AQ8IW50 185 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 CLEC18CQ8NCF0 446 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 OR11L1Q8NGX0 322 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 MRPL24Q96A35 216 aaKnown RBP10.96□□□□□ -0.65
CDH1-212ENST00000611625 SEC11CQ9BY50 192 aa10.96□□□□□ -0.65
CDH1-212ENST00000611625 PTPRZ1P23471 2315 aaPredicted RBP10.96□□□□□ -0.65
CDH1-212ENST00000611625 IL9P15248 144 aa10.96□□□□□ -0.66
CDH1-212ENST00000611625 RAC3P60763 192 aa10.96□□□□□ -0.66
CDH1-212ENST00000611625 C4orf17Q53FE4 359 aa10.96□□□□□ -0.66
CDH1-212ENST00000611625 ZNF429Q86V71 674 aa10.96□□□□□ -0.66
CDH1-212ENST00000611625 FAM24BQ8N5W8 94 aa10.96□□□□□ -0.66
CDH1-212ENST00000611625 ACTR3CQ9C0K3 210 aaPredicted RBP10.96□□□□□ -0.66
CDH1-212ENST00000611625 LINC01387J3KSC0 135 aa10.96□□□□□ -0.66
CDH1-212ENST00000611625 SCAF4O95104 1147 aaKnown RBP10.96□□□□□ -0.66
CDH1-212ENST00000611625 PRDX4Q13162 271 aa10.96□□□□□ -0.66
CDH1-212ENST00000611625 ZNF260Q3ZCT1 412 aa10.96□□□□□ -0.66
CDH1-212ENST00000611625 SPATA46Q5T0L3 261 aa10.96□□□□□ -0.66
CDH1-212ENST00000611625 SSX9Q7RTT3 188 aa10.96□□□□□ -0.66
CDH1-212ENST00000611625 NECAP1Q8NC96 275 aa10.96□□□□□ -0.66
CDH1-212ENST00000611625 C10orf35Q96D05 121 aa10.96□□□□□ -0.66
CDH1-212ENST00000611625 TUBG2Q9NRH3 451 aa10.96□□□□□ -0.66
CDH1-212ENST00000611625 MGAMO43451 1857 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 OR2A4O95047 310 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 EFEMP2O95967 443 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 TRA2AQ13595 282 aaKnown RBP eCLIP10.95□□□□□ -0.66
CDH1-212ENST00000611625 CLEC9AQ6UXN8 241 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 OR2M3Q8NG83 312 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 OR8U1Q8NH10 309 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 HPSE2Q8WWQ2 592 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 OR2A7Q96R45 310 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 SOSTQ9BQB4 213 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 EDEM2Q9BV94 578 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 MFSD2BA6NFX1 497 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 COX5AP20674 150 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 GAB4Q2WGN9 574 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 NHLRC3Q5JS37 347 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 RGS7BPQ6MZT1 257 aaPredicted RBP10.95□□□□□ -0.66
CDH1-212ENST00000611625 HOGA1Q86XE5 327 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 CLDN23Q96B33 292 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 CHST5Q9GZS9 411 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 MBP02144 154 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 ZBTB25P24278 435 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 IGLV3-21P80748 117 aaPredicted RBP10.95□□□□□ -0.66
CDH1-212ENST00000611625 ZNF273Q14593 569 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 PLGLAQ15195 96 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 ACER2Q5QJU3 275 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 P4HTMQ9NXG6 502 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 WNT16Q9UBV4 365 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 CCDC187A0A096LP49 1063 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 CCL11P51671 97 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 ZP1P60852 638 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 NCR3LG1Q68D85 454 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 LIAT1Q6ZQX7 453 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 TMEM104Q8NE00 496 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 UBALD1Q8TB05 177 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 POC1BQ8TC44 478 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 RGP1Q92546 391 aaPredicted RBP10.95□□□□□ -0.66
CDH1-212ENST00000611625 IP6K3Q96PC2 410 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 CIB3Q96Q77 187 aaPredicted RBP10.95□□□□□ -0.66
CDH1-212ENST00000611625 TGIF2Q9GZN2 237 aa10.95□□□□□ -0.66
CDH1-212ENST00000611625 ERRFI1Q9UJM3 462 aaPredicted RBP10.95□□□□□ -0.66
CDH1-212ENST00000611625 MPPED1O15442 326 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 PDGFBP01127 241 aaPredicted RBP10.94□□□□□ -0.66
CDH1-212ENST00000611625 POLR2GP62487 172 aaKnown RBP eCLIP10.94□□□□□ -0.66
CDH1-212ENST00000611625 H3F3AP84243 136 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 VAX1Q5SQQ9 334 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 GCNT2Q8N0V5 402 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 C15orf54Q8N8G6 183 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 ERGIC1Q969X5 290 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 FAM173AQ9BQD7 235 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 GAR1Q9NY12 217 aaKnown RBP10.94□□□□□ -0.66
CDH1-212ENST00000611625 LMX1BO60663 402 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 ZNF205O95201 554 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 RD3LP0DJH9 198 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 PNLIPP16233 465 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 NAAAQ02083 359 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 OR2T2Q6IF00 324 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 SMRP1Q8NCR6 262 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 ADIPOR1Q96A54 375 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 UCN2Q96RP3 112 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 LPAR5Q9H1C0 372 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 GEMIN2O14893 280 aaKnown RBP10.94□□□□□ -0.66
CDH1-212ENST00000611625 KCNAB3O43448 404 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 ISG15P05161 165 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 GPR12P47775 334 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 PMP22Q01453 160 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 EGR4Q05215 589 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 PLPPR5Q32ZL2 321 aa10.94□□□□□ -0.66
CDH1-212ENST00000611625 AWAT1Q58HT5 328 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms