RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 STARD6P59095 220 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 CCL20P78556 96 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 FBXW12Q6X9E4 464 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 PP6455Q8WZ26 134 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 YPEL4Q96NS1 127 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 NSG1A0A0A6YYJ2 146 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 A0A0U1RQV5 110 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 HEXBP07686 556 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 CTSSP25774 331 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 ITGA3P26006 1051 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 MTCP1P56278 107 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 PLXDC1Q8IUK5 500 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 OR2AE1Q8NHA4 323 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 SLC22A8Q8TCC7 542 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 C18orf12Q96KH6 178 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 SLC2A9Q9NRM0 540 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 MMP24Q9Y5R2 645 aa13.17□□□□□ -0.3
PCDHGB1-202ENST00000611598 ABCA7Q8IZY2 2146 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 AQP7P3A6NL99 342 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 ZNF727A8MUV8 499 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 H7C1Q1 480 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 K7N7A8 449 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 OR2C1O95371 312 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 MSR1P21757 451 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 ZNF133P52736 654 aaPredicted RBP13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 CLINT1Q14677 625 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 ARL6IP1Q15041 203 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 PPA1Q15181 289 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 OR2M3Q8NG83 312 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 MSI2Q96DH6 328 aaKnown RBP13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 GALNT14Q96FL9 552 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 WDR77Q9BQA1 342 aaPredicted RBP13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 NECAP2Q9NVZ3 263 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 IGKV1-27A0A075B6S5 117 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 IGHV3-15A0A0B4J1V0 119 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 FAM230AA0A1W2PPH8 454 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 IFITM10A6NMD0 228 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 TIAF1O95411 115 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 PNLIPP16233 465 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 RTL6Q6ICC9 239 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 HEPN1Q6WQI6 88 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 LIAT1Q6ZQX7 453 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 PBDC1Q9BVG4 233 aa13.16□□□□□ -0.3
PCDHGB1-202ENST00000611598 CDRT15L2A8MXV6 281 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 DUX1O43812 170 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 CD27P26842 260 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 PDCD1Q15116 288 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 SOHLH1Q5JUK2 328 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 GPR157Q5UAW9 335 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 PRAMEF20Q5VT98 475 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 CDPF1Q6NVV7 123 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 GJC3Q8NFK1 279 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 SLAMF9Q96A28 289 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 GGACTQ9BVM4 153 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 TMPRSS5Q9H3S3 457 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 STRAPQ9Y3F4 350 aaKnown RBP13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 M0R135 149 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 CHATP28329 748 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 MSX1P28360 303 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 DUSP1P28562 367 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 RPS10P46783 165 aaKnown RBP13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 HNRNPKP61978 463 aaKnown RBP eCLIP13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 LSM6P62312 80 aaKnown RBP13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 EIF3IQ13347 325 aaKnown RBP13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 RSU1Q15404 277 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 PIGYQ3MUY2 71 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 SLC22A25Q6T423 547 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 SUMF2Q8NBJ7 301 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 MR1Q95460 341 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 NABP1Q96AH0 204 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 SGK3Q96BR1 496 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 ZNF799Q96GE5 643 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 JSRP1Q96MG2 331 aaPredicted RBP13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 ZNF385AQ96PM9 386 aaKnown RBP13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 NELFAQ9H3P2 528 aa13.15□□□□□ -0.3
PCDHGB1-202ENST00000611598 ST8SIA3O43173 380 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 PHF1O43189 567 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 NDUFS6O75380 124 aaKnown RBP13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 RAB5CP51148 216 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 CEBPGP53567 150 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 EWSR1Q01844 656 aaKnown RBP eCLIP13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 HAGHQ16775 308 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 MEX3BQ6ZN04 569 aaKnown RBP13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 WDSUB1Q8N9V3 476 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 TSTD1Q8NFU3 115 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 ZNF837Q96EG3 531 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 TGIF2Q9GZN2 237 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 FAM24AA6NFZ4 105 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 GEMIN2O14893 280 aaKnown RBP13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 GUCA1AP43080 201 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 HTR5AP47898 357 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 KIAA0141Q14154 515 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 IL13RA2Q14627 380 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 ZNF343Q6P1L6 599 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 Q6ZPA2 131 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 SLC35G3Q8N808 338 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 LRTM2Q8N967 370 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 ZFP62Q8NB50 900 aaPredicted RBP13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 SUMF1Q8NBK3 374 aa13.14□□□□□ -0.31
PCDHGB1-202ENST00000611598 MUCL1Q96DR8 90 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms