RNA–Protein interactions for RNA: ENST00000608295.5

HDDC2-204, Transcript of HD domain containing 2, humanhuman

TSL 5 BASIC

Gene HDDC2, Length 879 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-204ENST00000608295 KPTNQ9Y664 436 aa11.9□□□□□ -0.5
HDDC2-204ENST00000608295 RNASEK-C17orf49H0YIS7 233 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 KNG1P01042 644 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 MYL12AP19105 171 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 COX7A1P24310 79 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 CAPGP40121 348 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 CCR9P51686 369 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 EDDM3BP56851 147 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 ERVK11-1P61568 191 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 ADARB1P78563 741 aaKnown RBP11.89□□□□□ -0.51
HDDC2-204ENST00000608295 ZNF273Q14593 569 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 TTC23Q5W5X9 447 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 ZNF782Q6ZMW2 699 aaPredicted RBP11.89□□□□□ -0.51
HDDC2-204ENST00000608295 C9orf139Q6ZV77 190 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 EGFL6Q8IUX8 553 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 C8orf59Q8N0T1 100 aaPredicted RBP11.89□□□□□ -0.51
HDDC2-204ENST00000608295 PIP4P2Q8N4L2 257 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 PACRGLQ8N7B6 248 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 TPRX1Q8N7U7 411 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 CCDC54Q8NEL0 328 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 C8orf46Q8TAG6 207 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 RGP1Q92546 391 aaPredicted RBP11.89□□□□□ -0.51
HDDC2-204ENST00000608295 ITFG2Q969R8 447 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 SLC25A28Q96A46 364 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 ORAI1Q96D31 301 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 HES4Q9HCC6 221 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 ING3Q9NXR8 418 aa11.89□□□□□ -0.51
HDDC2-204ENST00000608295 IGKV1-12A0A0C4DH73 117 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 TMEM212A6NML5 194 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 SIRPB1O00241 398 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 LALBAP00709 142 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 IGKV1D-12P01611 117 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 IGHV4-59P01825 116 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 ISG15P05161 165 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 MELTFP08582 738 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 CCDC159P0C7I6 412 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 PRKACBP22694 351 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 PAX6P26367 422 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 RPL31P62899 125 aaKnown RBP11.88□□□□□ -0.51
HDDC2-204ENST00000608295 AWAT1Q58HT5 328 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 FIP1L1Q6UN15 594 aaKnown RBP11.88□□□□□ -0.51
HDDC2-204ENST00000608295 LHFPL2Q6ZUX7 228 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 AHSA2Q719I0 299 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 ZNF561Q8N587 486 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 C10orf35Q96D05 121 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 ZCCHC4Q9H5U6 513 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 FGF20Q9NP95 211 aaPredicted RBP11.88□□□□□ -0.51
HDDC2-204ENST00000608295 TAS2R4Q9NYW5 299 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 GSTK1Q9Y2Q3 226 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 SIRT4Q9Y6E7 314 aaPredicted RBP11.88□□□□□ -0.51
HDDC2-204ENST00000608295 DSCAML1Q8TD84 2053 aa11.88□□□□□ -0.51
HDDC2-204ENST00000608295 CASQ2O14958 399 aaPredicted RBP11.87□□□□□ -0.51
HDDC2-204ENST00000608295 NPFFO15130 113 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 GPR37O15354 613 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 NOS1APO75052 506 aaPredicted RBP11.87□□□□□ -0.51
HDDC2-204ENST00000608295 HAND1O96004 215 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 CYB5AP00167 134 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 TK1P04183 234 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 RNASE1P07998 156 aaKnown RBP11.87□□□□□ -0.51
HDDC2-204ENST00000608295 RPSAP08865 295 aaKnown RBP11.87□□□□□ -0.51
HDDC2-204ENST00000608295 GABRR1P24046 479 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 CFPP27918 469 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 SAA4P35542 130 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 SCN1BQ07699 218 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 IL18R1Q13478 541 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 BLMHQ13867 455 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 CDK5R1Q15078 307 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 UTS2BQ765I0 119 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 SATL1Q86VE3 508 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 MKXQ8IYA7 352 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 KIR3DL3Q8N743 410 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 C3orf56Q8N813 242 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 BPIFB6Q8NFQ5 453 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 OR51A2Q8NGJ7 313 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 C17orf50Q8WW18 174 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 SPSB1Q96BD6 273 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 CHIAQ9BZP6 476 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 FAM192AQ9GZU8 254 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 VCXQ9H320 206 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 MRPS18AQ9NVS2 196 aaKnown RBP11.87□□□□□ -0.51
HDDC2-204ENST00000608295 DIMT1Q9UNQ2 313 aaKnown RBP11.87□□□□□ -0.51
HDDC2-204ENST00000608295 EXOSC1Q9Y3B2 195 aaKnown RBP11.87□□□□□ -0.51
HDDC2-204ENST00000608295 FAM96BQ9Y3D0 163 aa11.87□□□□□ -0.51
HDDC2-204ENST00000608295 TRBV23-1A0A0A0MS06 115 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 TMEM82A0PJX8 343 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 MEIOCA2RUB1 952 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 TMEM89A2RUT3 159 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 SULT1B1O43704 296 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 EEF1B2P24534 225 aaKnown RBP11.86□□□□□ -0.51
HDDC2-204ENST00000608295 DCKP27707 260 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 BMXP51813 675 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 AQP4P55087 323 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 TUSC1Q2TAM9 212 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 TMEM200BQ69YZ2 307 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 LAIR2Q6ISS4 152 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 Q6YL49 198 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 TMPRSS11AQ6ZMR5 421 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 GDPD3Q7L5L3 318 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 FAM58AQ8N1B3 248 aa11.86□□□□□ -0.51
HDDC2-204ENST00000608295 DNAAF1Q8NEP3 725 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms