RNA–Protein interactions for RNA: ENST00000607092.1

CUX1-220, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-220ENST00000607092 OR5M11Q96RB7 305 aa5.06□□□□□ -1.6
CUX1-220ENST00000607092 MNTQ99583 582 aa5.06□□□□□ -1.6
CUX1-220ENST00000607092 CHID1Q9BWS9 393 aa5.06□□□□□ -1.6
CUX1-220ENST00000607092 PRRG3Q9BZD7 231 aa5.06□□□□□ -1.6
CUX1-220ENST00000607092 YIPF3Q9GZM5 350 aa5.06□□□□□ -1.6
CUX1-220ENST00000607092 VCX3BQ9H321 246 aa5.06□□□□□ -1.6
CUX1-220ENST00000607092 GAL3ST2Q9H3Q3 398 aa5.06□□□□□ -1.6
CUX1-220ENST00000607092 MUC13Q9H3R2 512 aa5.06□□□□□ -1.6
CUX1-220ENST00000607092 MAGIXQ9H6Y5 334 aa5.06□□□□□ -1.6
CUX1-220ENST00000607092 SEBOXQ9HB31 216 aaPredicted RBP5.06□□□□□ -1.6
CUX1-220ENST00000607092 KRT84Q9NSB2 600 aa5.06□□□□□ -1.6
CUX1-220ENST00000607092 ZFP57Q9NU63 452 aa5.06□□□□□ -1.6
CUX1-220ENST00000607092 CHCHD3Q9NX63 227 aaKnown RBP5.06□□□□□ -1.6
CUX1-220ENST00000607092 SLC7A11Q9UPY5 501 aa5.06□□□□□ -1.6
CUX1-220ENST00000607092 LINC00312Q9Y6C7 94 aa5.06□□□□□ -1.6
CUX1-220ENST00000607092 V9GYQ6 96 aa5.06□□□□□ -1.6
CUX1-220ENST00000607092 TMEM269A0A1B0GVZ9 245 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 A0A1W2PRX2 142 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 ARRDC5A6NEK1 342 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 LEUTXA8MZ59 168 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 OOSP1A8MZH6 123 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 ARPC2O15144 300 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 OR2F2O95006 317 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 HTR3BO95264 441 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 SERPINA3P01011 423 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 NRASP01111 189 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 GASTP01350 101 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 MPZP25189 248 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 PEX2P28328 305 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 MSX2P35548 267 aaPredicted RBP5.05□□□□□ -1.6
CUX1-220ENST00000607092 VHLP40337 213 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 MAGEA2P43356 314 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 RIDAP52758 137 aaKnown RBP5.05□□□□□ -1.6
CUX1-220ENST00000607092 DLX1P56177 255 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 EDDM3BP56851 147 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 ACTA2P62736 377 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 ACTG2P63267 376 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 ACTC1P68032 377 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 ACTA1P68133 377 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 SLC35B1P78383 322 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 DGCR2P98153 550 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 IL24Q13007 206 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 HABP2Q14520 560 aaPredicted RBP5.05□□□□□ -1.6
CUX1-220ENST00000607092 MICAQ29983 383 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 PLA1AQ53H76 456 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 KHDC1LQ5JSQ8 128 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 CEP78Q5JTW2 689 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 LYPD4Q6UWN0 246 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 C8orf86Q6ZUL3 223 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 MOB3CQ70IA8 216 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 LHFPL4Q7Z7J7 247 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 TMEM219Q86XT9 240 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 OR8H2Q8N162 312 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 C11orf42Q8N5U0 333 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 CD177Q8N6Q3 437 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 ZNF676Q8N7Q3 588 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 OR4M1Q8NGD0 313 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 OR9Q2Q8NGE9 314 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 OR8B12Q8NGG6 310 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 CHPT1Q8WUD6 406 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 ZNRF4Q8WWF5 429 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 MYDGFQ969H8 173 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 ASB9Q96DX5 294 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 SNX22Q96L94 193 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 CLEC7AQ9BXN2 247 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 GON7Q9BXV9 100 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 PKIBQ9C010 78 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 OR51V1Q9H2C8 321 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 TMEM133Q9H2Q1 129 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 ZNF556Q9HAH1 456 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 ELL3Q9HB65 397 aaPredicted RBP5.05□□□□□ -1.6
CUX1-220ENST00000607092 S100A14Q9HCY8 104 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 PAPOLBQ9NRJ5 636 aaKnown RBP5.05□□□□□ -1.6
CUX1-220ENST00000607092 ACTR3BQ9P1U1 418 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 ZNF319Q9P2F9 582 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 DPM3Q9P2X0 92 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 OR14J1Q9UGF5 321 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 NUFIP1Q9UHK0 495 aaKnown RBP5.05□□□□□ -1.6
CUX1-220ENST00000607092 SLC22A13Q9Y226 551 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 PIGLQ9Y2B2 252 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 SIRT4Q9Y6E7 314 aaPredicted RBP5.05□□□□□ -1.6
CUX1-220ENST00000607092 SESN1Q9Y6P5 492 aa5.05□□□□□ -1.6
CUX1-220ENST00000607092 IGHV2-26A0A0B4J1V2 119 aa5.04□□□□□ -1.6
CUX1-220ENST00000607092 PSMB11A5LHX3 300 aa5.04□□□□□ -1.6
CUX1-220ENST00000607092 AQP12BA6NM10 295 aa5.04□□□□□ -1.6
CUX1-220ENST00000607092 GATBO75879 557 aaKnown RBP5.04□□□□□ -1.6
CUX1-220ENST00000607092 SOX14O95416 240 aa5.04□□□□□ -1.6
CUX1-220ENST00000607092 FAM106CPP0CH98 169 aa5.04□□□□□ -1.6
CUX1-220ENST00000607092 VSIG8P0DPA2 414 aa5.04□□□□□ -1.6
CUX1-220ENST00000607092 CLUP10909 449 aa5.04□□□□□ -1.6
CUX1-220ENST00000607092 PIPP12273 146 aaPredicted RBP5.04□□□□□ -1.6
CUX1-220ENST00000607092 CCL3L1P16619 93 aa5.04□□□□□ -1.6
CUX1-220ENST00000607092 ALOX5APP20292 161 aa5.04□□□□□ -1.6
CUX1-220ENST00000607092 ANOS1P23352 680 aa5.04□□□□□ -1.6
CUX1-220ENST00000607092 ERP29P30040 261 aaKnown RBP5.04□□□□□ -1.6
CUX1-220ENST00000607092 MYCNOSP40205 109 aa5.04□□□□□ -1.6
CUX1-220ENST00000607092 RAB13P51153 203 aa5.04□□□□□ -1.6
CUX1-220ENST00000607092 PRRX1P54821 245 aa5.04□□□□□ -1.6
CUX1-220ENST00000607092 CDC42P60953 191 aa5.04□□□□□ -1.6
CUX1-220ENST00000607092 RPS7P62081 194 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms