RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 CCR9P51686 369 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 RAB40BQ12829 278 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 FOXL1Q12952 345 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 ZNF691Q5VV52 312 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 TMEM200BQ69YZ2 307 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 CRIP3Q6Q6R5 217 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 LDLRAD3Q86YD5 345 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 MKXQ8IYA7 352 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 C11orf42Q8N5U0 333 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 ZNF676Q8N7Q3 588 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 ASCC1Q8N9N2 400 aaKnown RBP10.05□□□□□ -0.8
CTSA-210ENST00000606000 CCDC54Q8NEL0 328 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 ZNF555Q8NEP9 628 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 OR5D18Q8NGL1 313 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 PP6455Q8WZ26 134 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 EMG1Q92979 244 aaKnown RBP10.05□□□□□ -0.8
CTSA-210ENST00000606000 Q96MT0 163 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 PDCD1LG2Q9BQ51 273 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 METTL8Q9H825 291 aaKnown RBP10.05□□□□□ -0.8
CTSA-210ENST00000606000 UNKLQ9H9P5 680 aaKnown RBP10.05□□□□□ -0.8
CTSA-210ENST00000606000 NKX1-2Q9UD57 310 aaPredicted RBP10.05□□□□□ -0.8
CTSA-210ENST00000606000 HHLA2Q9UM44 414 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 STAB1Q9NY15 2570 aa10.05□□□□□ -0.8
CTSA-210ENST00000606000 TRBV23-1A0A0A0MS06 115 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 IGKV1-12A0A0C4DH73 117 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 TMEM82A0PJX8 343 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 H0YAE9 185 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 ZNF737O75373 536 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 FADS2O95864 444 aaKnown RBP10.04□□□□□ -0.8
CTSA-210ENST00000606000 SERPINA3P01011 423 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 IGKV1D-12P01611 117 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 LIMS3P0CW19 117 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 LIMS4P0CW20 117 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 DUSP1P28562 367 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 IER3P46695 156 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 RBP2P50120 134 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 ETV1P50549 477 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 RPL31P62899 125 aaKnown RBP10.04□□□□□ -0.8
CTSA-210ENST00000606000 TAF9Q16594 264 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 OR2G6Q5TZ20 316 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 ZNF782Q6ZMW2 699 aaPredicted RBP10.04□□□□□ -0.8
CTSA-210ENST00000606000 UTS2BQ765I0 119 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 TCF23Q7RTU1 214 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 EGFL6Q8IUX8 553 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 SYS1Q8N2H4 156 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 TPRX1Q8N7U7 411 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 CYGBQ8WWM9 190 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 RGP1Q92546 391 aaPredicted RBP10.04□□□□□ -0.8
CTSA-210ENST00000606000 C10orf35Q96D05 121 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 DMRTB1Q96MA1 342 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 OPALINQ96PE5 141 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 NKX3-1Q99801 234 aaPredicted RBP10.04□□□□□ -0.8
CTSA-210ENST00000606000 KRTAP3-3Q9BYR6 98 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 KRTAP3-2Q9BYR7 98 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 CHST6Q9GZX3 395 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 MRPS18AQ9NVS2 196 aaKnown RBP10.04□□□□□ -0.8
CTSA-210ENST00000606000 C1RLQ9NZP8 487 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 ZNRD1Q9P1U0 126 aa10.04□□□□□ -0.8
CTSA-210ENST00000606000 RPL36Q9Y3U8 105 aaKnown RBP10.04□□□□□ -0.8
CTSA-210ENST00000606000 MEIOCA2RUB1 952 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 K7N7A8 449 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 GPR137BO60478 399 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 PRKACAP17612 351 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 COX7A1P24310 79 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 BMXP51813 675 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 ATP1B3P54709 279 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 MTCP1P56278 107 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 EDDM3BP56851 147 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 GUCA2AQ02747 115 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 SRSF4Q08170 494 aaKnown RBP10.03□□□□□ -0.8
CTSA-210ENST00000606000 EDDM3AQ14507 147 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 ASPHD2Q6ICH7 369 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 LHFPL2Q6ZUX7 228 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 DNAAF1Q8NEP3 725 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 OR52N4Q8NGI2 321 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 SSMEM1Q8WWF3 244 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 AJUBAQ96IF1 538 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 RDH12Q96NR8 316 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 ZNF747Q9BV97 191 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 FGF20Q9NP95 211 aaPredicted RBP10.03□□□□□ -0.8
CTSA-210ENST00000606000 INPP5EQ9NRR6 644 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 FAM96BQ9Y3D0 163 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 POMT1Q9Y6A1 747 aa10.03□□□□□ -0.8
CTSA-210ENST00000606000 TRBV2A0A0J9YWF9 115 aa10.02□□□□□ -0.81
CTSA-210ENST00000606000 PSPNO60542 156 aa10.02□□□□□ -0.81
CTSA-210ENST00000606000 HAND1O96004 215 aa10.02□□□□□ -0.81
CTSA-210ENST00000606000 FBP1P09467 338 aa10.02□□□□□ -0.81
CTSA-210ENST00000606000 GNAO1P09471 354 aa10.02□□□□□ -0.81
CTSA-210ENST00000606000 PRKACBP22694 351 aa10.02□□□□□ -0.81
CTSA-210ENST00000606000 EEF1B2P24534 225 aaKnown RBP10.02□□□□□ -0.81
CTSA-210ENST00000606000 SOX2P48431 317 aa10.02□□□□□ -0.81
CTSA-210ENST00000606000 UBE2E1P51965 193 aa10.02□□□□□ -0.81
CTSA-210ENST00000606000 RAG2P55895 527 aa10.02□□□□□ -0.81
CTSA-210ENST00000606000 DLX6P56179 175 aa10.02□□□□□ -0.81
CTSA-210ENST00000606000 ADARB1P78563 741 aaKnown RBP10.02□□□□□ -0.81
CTSA-210ENST00000606000 PDZK1IP1Q13113 114 aa10.02□□□□□ -0.81
CTSA-210ENST00000606000 IL18R1Q13478 541 aa10.02□□□□□ -0.81
CTSA-210ENST00000606000 BLMHQ13867 455 aa10.02□□□□□ -0.81
CTSA-210ENST00000606000 NCR3LG1Q68D85 454 aa10.02□□□□□ -0.81
CTSA-210ENST00000606000 C17orf107Q6ZR85 190 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms