RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 FAM90A18PA6NE21 464 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FAM90A16PA6NEW6 464 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FAM90A20PA6NIJ5 464 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FAM90A8PA6NJQ4 464 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FAM90A7PA6NKC0 464 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FAM90A22PA8MWA6 464 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FAM90A12PA8MX19 464 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FAM90A5PA8MXJ8 464 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FAM90A23PA8MXZ1 464 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 F8VVB4 439 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 F8VWA3 439 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 NXPH2O95156 264 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FAM90A15PP0C7V4 464 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FAM90A13PP0C7W8 464 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FAM90A14PP0C7W9 464 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FAM90A24PP0C7X0 464 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 IL7P13232 177 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 BLVRBP30043 206 aaPredicted RBP19.1■□□□□ 0.65
IRF3-228ENST00000601291 ERVK11-1P61568 191 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 BAK1Q16611 211 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 FIP1L1Q6UN15 594 aaKnown RBP19.1■□□□□ 0.65
IRF3-228ENST00000601291 LINC00596Q86U02 117 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 MOGAT3Q86VF5 341 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 OR10Z1Q8NGY1 313 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 SMIM4Q8WVI0 70 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 AUNIPQ9H7T9 357 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 DECR2Q9NUI1 292 aa19.1■□□□□ 0.65
IRF3-228ENST00000601291 GABARAPH6UMI1 98 aa19.09■□□□□ 0.65
IRF3-228ENST00000601291 GEMIN2O14893 280 aaKnown RBP19.09■□□□□ 0.65
IRF3-228ENST00000601291 GSTZ1O43708 216 aaPredicted RBP19.09■□□□□ 0.65
IRF3-228ENST00000601291 CSF3P09919 207 aa19.09■□□□□ 0.65
IRF3-228ENST00000601291 HIST1H1DP16402 221 aaKnown RBP19.09■□□□□ 0.65
IRF3-228ENST00000601291 AGAP6Q5VW22 663 aa19.09■□□□□ 0.65
IRF3-228ENST00000601291 Q6ZTK2 550 aa19.09■□□□□ 0.65
IRF3-228ENST00000601291 FCAMRQ8WWV6 532 aa19.09■□□□□ 0.65
IRF3-228ENST00000601291 FOXI3A8MTJ6 420 aaPredicted RBP19.08■□□□□ 0.65
IRF3-228ENST00000601291 H3BUI4 141 aa19.08■□□□□ 0.65
IRF3-228ENST00000601291 GSTP1P09211 210 aaKnown RBP19.08■□□□□ 0.65
IRF3-228ENST00000601291 PRSS3P35030 304 aa19.08■□□□□ 0.65
IRF3-228ENST00000601291 INPP1P49441 399 aa19.08■□□□□ 0.65
IRF3-228ENST00000601291 SNU13P55769 128 aaKnown RBP19.08■□□□□ 0.65
IRF3-228ENST00000601291 CCL8P80075 99 aa19.08■□□□□ 0.65
IRF3-228ENST00000601291 DGCR2P98153 550 aa19.08■□□□□ 0.65
IRF3-228ENST00000601291 IL13RA2Q14627 380 aa19.08■□□□□ 0.65
IRF3-228ENST00000601291 MPV17LQ2QL34 196 aa19.08■□□□□ 0.65
IRF3-228ENST00000601291 ZNF260Q3ZCT1 412 aa19.08■□□□□ 0.65
IRF3-228ENST00000601291 CDNFQ49AH0 187 aa19.08■□□□□ 0.65
IRF3-228ENST00000601291 RNASE12Q5GAN4 147 aaKnown RBP19.08■□□□□ 0.65
IRF3-228ENST00000601291 LRRC29Q8WV35 223 aa19.08■□□□□ 0.65
IRF3-228ENST00000601291 NEDD4LQ96PU5 975 aa19.08■□□□□ 0.65
IRF3-228ENST00000601291 THAP7Q9BT49 309 aaPredicted RBP19.08■□□□□ 0.65
IRF3-228ENST00000601291 ZMAT3Q9HA38 289 aaKnown RBP19.08■□□□□ 0.65
IRF3-228ENST00000601291 SAP30LQ9HAJ7 183 aa19.08■□□□□ 0.65
IRF3-228ENST00000601291 CBLN4Q9NTU7 201 aa19.08■□□□□ 0.65
IRF3-228ENST00000601291 OR7C1O76099 320 aaPredicted RBP19.07■□□□□ 0.64
IRF3-228ENST00000601291 PTHLHP12272 177 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 GNB3P16520 340 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 GLRA1P23415 457 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 CFHR2P36980 270 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 PPOXP50336 477 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 TMEM50BP56557 158 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 SPRNQ5BIV9 151 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 PLAC9Q5JTB6 97 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 NKAPLQ5M9Q1 402 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 OR11L1Q8NGX0 322 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 GCDHQ92947 438 aaPredicted RBP19.07■□□□□ 0.64
IRF3-228ENST00000601291 ARHGAP5-AS1Q96IT6 56 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 SCPEP1Q9HB40 452 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 HES4Q9HCC6 221 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 GCM1Q9NP62 436 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 PLEKHJ1Q9NW61 149 aa19.07■□□□□ 0.64
IRF3-228ENST00000601291 CLEC18AA5D8T8 446 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 TMEM235A6NFC5 223 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 GMFBP60983 142 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 SCN1BQ07699 218 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 SPIN3Q5JUX0 258 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 STEAP3Q658P3 488 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 CLEC18BQ6UXF7 455 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 ZCCHC24Q8N2G6 241 aaKnown RBP19.06■□□□□ 0.64
IRF3-228ENST00000601291 CLEC18CQ8NCF0 446 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 C19orf18Q8NEA5 215 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 PECRQ9BY49 303 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 RASL12Q9NYN1 266 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 HSF4Q9ULV5 492 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 PPP1R3CQ9UQK1 317 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 PLCE1Q9P212 2302 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 SERPINE3A8MV23 424 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 SULT1C2O00338 296 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 MFNGO00587 321 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 PDCD6O75340 191 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 IFITM3Q01628 133 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 IKZF1Q13422 519 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 PNLIPRP3Q17RR3 467 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 SMIM21Q3B7S5 101 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 HACD4Q5VWC8 232 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 LYSMD2Q8IV50 215 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 OR52I2Q8NH67 350 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 Q8TCH9 128 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 HPS1Q92902 700 aa19.06■□□□□ 0.64
IRF3-228ENST00000601291 YIPF5Q969M3 257 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms