RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 C2CD4DB7Z1M9 353 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 TMEM127O75204 238 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 CD40P25942 277 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 SELENOPP49908 381 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 YBX1P67809 324 aaKnown RBP10.53□□□□□ -0.72
SCN8A-208ENST00000599343 C17orf47Q8NEP4 570 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 IL36GQ9NZH8 169 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 RGS13O14921 159 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 BMI1P35226 326 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 RPL24P83731 157 aaKnown RBP10.53□□□□□ -0.72
SCN8A-208ENST00000599343 TMEM9BQ9NQ34 198 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 EXOGQ9Y2C4 368 aaKnown RBP10.53□□□□□ -0.72
SCN8A-208ENST00000599343 NUP98P52948 1817 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 FAM157AC9JC47 383 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 SRFP11831 508 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 Q6ZS52 159 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 PRSS41Q7RTY9 318 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 OR6S1Q8NH40 331 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 TMEM208Q9BTX3 173 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 BET1LQ9NYM9 111 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 FER1L6Q2WGJ9 1857 aa10.53□□□□□ -0.72
SCN8A-208ENST00000599343 TMEM265A0A087WTH1 108 aa10.52□□□□□ -0.72
SCN8A-208ENST00000599343 PRSS1P07477 247 aa10.52□□□□□ -0.72
SCN8A-208ENST00000599343 ACAA2P42765 397 aaKnown RBP10.52□□□□□ -0.72
SCN8A-208ENST00000599343 HLA-DRB3P79483 266 aa10.52□□□□□ -0.72
SCN8A-208ENST00000599343 FOXC1Q12948 553 aa10.52□□□□□ -0.72
SCN8A-208ENST00000599343 FZD5Q13467 585 aa10.52□□□□□ -0.72
SCN8A-208ENST00000599343 HLA-BQ31612 363 aa10.52□□□□□ -0.72
SCN8A-208ENST00000599343 TMEM116Q8NCL8 245 aa10.52□□□□□ -0.72
SCN8A-208ENST00000599343 LIPGQ9Y5X9 500 aa10.52□□□□□ -0.72
SCN8A-208ENST00000599343 FAM90A27PA6NNH2 459 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 HPXP02790 462 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 CRYBA1P05813 215 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 ANKRD34CP0C6C1 535 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 CDKN2AP42771 156 aaKnown RBP10.52□□□□□ -0.73
SCN8A-208ENST00000599343 RAB7AP51149 207 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 POLR2GP62487 172 aaKnown RBP eCLIP10.52□□□□□ -0.73
SCN8A-208ENST00000599343 ZNF788Q6ZQV5 615 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 SPICQ8N5J4 248 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 ISOC2Q96AB3 205 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 OR10C1Q96KK4 312 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 LINC00052Q96N35 136 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 GPR87Q9BY21 358 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 ADAP1O75689 374 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 OR3A1P47881 315 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 TSPO2Q5TGU0 170 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 PRSS54Q6PEW0 395 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 C16orf47Q6ZP98 133 aaPredicted RBP10.52□□□□□ -0.73
SCN8A-208ENST00000599343 Q7L0L9 218 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 MS4A18H0YCH9 400 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 LYZL6O75951 148 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 DAOP14920 347 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 FGF9P31371 208 aaPredicted RBP10.52□□□□□ -0.73
SCN8A-208ENST00000599343 SULT1A1P50225 295 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 MS4A18Q3C1V0 323 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 SLC35E4Q6ICL7 350 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 LIAT1Q6ZQX7 453 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 NEIL1Q96FI4 390 aaPredicted RBP10.52□□□□□ -0.73
SCN8A-208ENST00000599343 LPAR3Q9UBY5 353 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 PPIL1Q9Y3C6 166 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 SPTY2D1-AS1A0A0U1RR47 76 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 INHBBP09529 407 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 IL13RA2Q14627 380 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 FDX2Q6P4F2 183 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 TDHQ8IZJ6 230 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 LILRB1Q8NHL6 650 aaPredicted RBP10.52□□□□□ -0.73
SCN8A-208ENST00000599343 RNF24Q9Y225 148 aa10.52□□□□□ -0.73
SCN8A-208ENST00000599343 RBFOX3A6NFN3 312 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 K7ESF4 209 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 GP1BAP07359 652 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 BCL3P20749 454 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 WNT3P56703 355 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 TMEM33P57088 247 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 B2MP61769 119 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 TNXAQ16473 311 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 TRAT1Q6PIZ9 186 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 DYRK2Q92630 601 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 SMAD4Q13485 552 aaKnown RBP10.51□□□□□ -0.73
SCN8A-208ENST00000599343 NUFIP2Q7Z417 695 aaKnown RBP10.51□□□□□ -0.73
SCN8A-208ENST00000599343 ZG16BQ96DA0 208 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 PECRQ9BY49 303 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 SEBOXQ9HB31 216 aaPredicted RBP10.51□□□□□ -0.73
SCN8A-208ENST00000599343 TREM2Q9NZC2 230 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 DUXBA0A1W2PPF3 345 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 NKX2-2O95096 273 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 MDH2P40926 338 aaKnown RBP10.51□□□□□ -0.73
SCN8A-208ENST00000599343 SULT1A2P50226 295 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 UBE2L3P68036 154 aaKnown RBP10.51□□□□□ -0.73
SCN8A-208ENST00000599343 GUSBP11Q6P575 273 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 DEFB123Q8N688 67 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 SLC26A10Q8NG04 563 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 OR1L3Q8NH93 324 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 PHYHIPLQ96FC7 376 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 SLC7A10Q9NS82 523 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 METTL12A8MUP2 240 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 GPR3P46089 330 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 MEOX2P50222 304 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 CD300CQ08708 224 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 AWAT1Q58HT5 328 aa10.51□□□□□ -0.73
SCN8A-208ENST00000599343 WDFY2Q96P53 400 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms