RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 TET2Q6N021 2002 aaPredicted RBP11.02□□□□□ -0.65
TRIM28-211ENST00000597968 hADV38S2A0JD32 116 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 SYT7O43581 403 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 IGHV1-8P0DP01 117 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 FCGR1AP12314 374 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 CCL3L1P16619 93 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 HTR1FP30939 366 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 POLR2IP36954 125 aaKnown RBP11.01□□□□□ -0.65
TRIM28-211ENST00000597968 BMXP51813 675 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 COL10A1Q03692 680 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 ZNF273Q14593 569 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 CNN3Q15417 329 aaKnown RBP11.01□□□□□ -0.65
TRIM28-211ENST00000597968 ATP6AP1Q15904 470 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 PLEKHG7Q6ZR37 379 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 CATSPERDQ86XM0 798 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 NDUFA11Q86Y39 141 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 ASCC1Q8N9N2 400 aaKnown RBP11.01□□□□□ -0.65
TRIM28-211ENST00000597968 OR4F17Q8NGA8 305 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 OR4M1Q8NGD0 313 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 RFKQ969G6 155 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 ZNF488Q96MN9 340 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 ZNF714Q96N38 554 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 OR4F4Q96R69 305 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 IL4I1Q96RQ9 567 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 ADI1Q9BV57 179 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 PRSS22Q9GZN4 317 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 RHOFQ9HBH0 211 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.01□□□□□ -0.65
TRIM28-211ENST00000597968 OR14J1Q9UGF5 321 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 AP4S1Q9Y587 144 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 LINC00312Q9Y6C7 94 aa11.01□□□□□ -0.65
TRIM28-211ENST00000597968 MEGF11A6BM72 1044 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 A6NDX4 124 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 METTL15A6NJ78 407 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 CYB5AP00167 134 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 ARG1P05089 322 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 RPSAP08865 295 aaKnown RBP11□□□□□ -0.65
TRIM28-211ENST00000597968 UBCP0CG48 685 aaKnown RBP11□□□□□ -0.65
TRIM28-211ENST00000597968 COX7A1P24310 79 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 FASP25445 335 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 PEX2P28328 305 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 ERP29P30040 261 aaKnown RBP11□□□□□ -0.65
TRIM28-211ENST00000597968 RASSF2P50749 326 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 OR12D2P58182 307 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 CDC42P60953 191 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 IL18R1Q13478 541 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 SPIN3Q5JUX0 258 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 C1orf146Q5VVC0 180 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 C16orf82Q7Z2V1 217 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 KCTD20Q7Z5Y7 419 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 YIPF7Q8N8F6 280 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 OR8J1Q8NGP2 316 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 WIPF2Q8TF74 440 aaPredicted RBP11□□□□□ -0.65
TRIM28-211ENST00000597968 BORCS8Q96FH0 119 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 ZNF702PQ9H963 129 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 SERTAD4Q9NUC0 356 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 MTCH1Q9NZJ7 389 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 GLS2Q9UI32 602 aa11□□□□□ -0.65
TRIM28-211ENST00000597968 FUOMA2VDF0 154 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 A6NIN4 97 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 CHST1O43916 411 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 FBXO24O75426 580 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 RBP2P50120 134 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 ARHGDIBP52566 201 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 EDDM3BP56851 147 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 ZNF146Q15072 292 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 UBE2V2Q15819 145 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 TMEM244Q5VVB8 128 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 OR52W1Q6IF63 320 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 LHFPL4Q7Z7J7 247 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 ANGPTL5Q86XS5 388 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 EGFL6Q8IUX8 553 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 TRUB1Q8WWH5 349 aaKnown RBP10.99□□□□□ -0.65
TRIM28-211ENST00000597968 AKR1E2Q96JD6 320 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 MYCBPQ99417 103 aaPredicted RBP10.99□□□□□ -0.65
TRIM28-211ENST00000597968 WNT10AQ9GZT5 417 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 FOXJ3Q9UPW0 622 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 ZNF281Q9Y2X9 895 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 SIGLEC9Q9Y336 463 aa10.99□□□□□ -0.65
TRIM28-211ENST00000597968 TRBV2A0A0J9YWF9 115 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 FAM230AA0A1W2PPH8 454 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 MGST3O14880 152 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 PEX14O75381 377 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 APOL3O95236 402 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 ISG15P05161 165 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 VSIG10L2P0DP72 767 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 PRKACBP22694 351 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 CEBPDP49716 269 aaPredicted RBP10.98□□□□□ -0.65
TRIM28-211ENST00000597968 ATP1B3P54709 279 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 FAM189A2Q15884 450 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 SSX2Q16385 188 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 ZNF782Q6ZMW2 699 aaPredicted RBP10.98□□□□□ -0.65
TRIM28-211ENST00000597968 UTS2BQ765I0 119 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 FAM220AQ7Z4H9 259 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 RTN4RL2Q86UN3 420 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 CREB3L1Q96BA8 519 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 SPSB1Q96BD6 273 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 CIB1Q99828 191 aa10.98□□□□□ -0.65
TRIM28-211ENST00000597968 UBE2J1Q9Y385 318 aaPredicted RBP10.98□□□□□ -0.65
TRIM28-211ENST00000597968 SESN1Q9Y6P5 492 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms