RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 hCG_1809904A0A1W2PP81 198 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 A0A1W2PPE2 198 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 A0A1W2PR64 198 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 A0A1W2PRV1 198 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 ANGPTL7O43827 346 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 HTR1AP08908 422 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 RBP2P50120 134 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 MTCP1P56278 107 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 CNN3Q15417 329 aaKnown RBP12.29□□□□□ -0.44
LIG1-215ENST00000597901 MIDNQ504T8 468 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 UTS2BQ765I0 119 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 ENTHD1Q8IYW4 607 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 ZSCAN4Q8NAM6 433 aaPredicted RBP12.29□□□□□ -0.44
LIG1-215ENST00000597901 BEND2Q8NDZ0 799 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 LINC01006Q8NI28 216 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 C17orf50Q8WW18 174 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 PELI1Q96FA3 418 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 AJUBAQ96IF1 538 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 Q96MT0 163 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 SEBOXQ9HB31 216 aaPredicted RBP12.29□□□□□ -0.44
LIG1-215ENST00000597901 AMBNQ9NP70 447 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 FAM118AQ9NWS6 357 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 MYRFQ9Y2G1 1151 aa12.29□□□□□ -0.44
LIG1-215ENST00000597901 BTBD17A6NE02 478 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 OR4C45A6NMZ5 311 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 MPZL2O60487 215 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 ZNF737O75373 536 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 DBTP11182 482 aaKnown RBP12.28□□□□□ -0.44
LIG1-215ENST00000597901 CCL3L1P16619 93 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 PRKACBP22694 351 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 NPBWR2P48146 333 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 ALKBH1Q13686 389 aaKnown RBP12.28□□□□□ -0.44
LIG1-215ENST00000597901 GALEQ14376 348 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 ZNF273Q14593 569 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 C17orf107Q6ZR85 190 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 Q6ZSV7 163 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 PQLC1Q8N2U9 271 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 ASCC1Q8N9N2 400 aaKnown RBP12.28□□□□□ -0.44
LIG1-215ENST00000597901 WFDC12Q8WWY7 111 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 C4orf36Q96KX1 117 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 SNX22Q96L94 193 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 MEGF9Q9H1U4 602 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 ISG20L2Q9H9L3 353 aaKnown RBP12.28□□□□□ -0.44
LIG1-215ENST00000597901 VPREB3Q9UKI3 123 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 HHLA2Q9UM44 414 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 RNF114Q9Y508 228 aa12.28□□□□□ -0.44
LIG1-215ENST00000597901 TMEM82A0PJX8 343 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 C17orf98A8MV24 154 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 BAG2O95816 211 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 FADS2O95864 444 aaKnown RBP12.27□□□□□ -0.45
LIG1-215ENST00000597901 PIPP12273 146 aaPredicted RBP12.27□□□□□ -0.45
LIG1-215ENST00000597901 ZNF20P17024 532 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 TGFBR2P37173 567 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 DLX6P56179 175 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 KRTAP10-3P60369 221 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 ACTA2P62736 377 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 ACTG2P63267 376 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 ZNF91Q05481 1191 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 GDPD3Q7L5L3 318 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 OR10AC1Q8NH08 325 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 OR5R1Q8NH85 324 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 EMG1Q92979 244 aaKnown RBP12.27□□□□□ -0.45
LIG1-215ENST00000597901 MRPL48Q96GC5 212 aaKnown RBP12.27□□□□□ -0.45
LIG1-215ENST00000597901 MYCBPQ99417 103 aaPredicted RBP12.27□□□□□ -0.45
LIG1-215ENST00000597901 SSX3Q99909 188 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 ZNF649Q9BS31 505 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 ALG8Q9BVK2 526 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 C16orf95Q9H693 158 aa12.27□□□□□ -0.45
LIG1-215ENST00000597901 MRPS18AQ9NVS2 196 aaKnown RBP12.27□□□□□ -0.45
LIG1-215ENST00000597901 WIPF1O43516 503 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 TSPAN9O75954 239 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 CYB5AP00167 134 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 CALCBP10092 127 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 BCL3P20749 454 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 COX7A1P24310 79 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 AZGP1P25311 298 aaKnown RBP12.26□□□□□ -0.45
LIG1-215ENST00000597901 DUSP1P28562 367 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 POU3F4P49335 361 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 PDZK1IP1Q13113 114 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 LHFPL2Q6ZUX7 228 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 Q8IYB0 196 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 FAM58AQ8N1B3 248 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 SYS1Q8N2H4 156 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 ZNF676Q8N7Q3 588 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 OR52N4Q8NGI2 321 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 OR51A4Q8NGJ6 313 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 RBFOX1Q9NWB1 397 aaKnown RBP12.26□□□□□ -0.45
LIG1-215ENST00000597901 ERVK13-1Q9NX77 482 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 IL36RNQ9UBH0 155 aa12.26□□□□□ -0.45
LIG1-215ENST00000597901 RPL36Q9Y3U8 105 aaKnown RBP12.26□□□□□ -0.45
LIG1-215ENST00000597901 MEX3AA1L020 520 aaKnown RBP12.25□□□□□ -0.45
LIG1-215ENST00000597901 E9PI62 339 aa12.25□□□□□ -0.45
LIG1-215ENST00000597901 H3BUX3 64 aa12.25□□□□□ -0.45
LIG1-215ENST00000597901 CLPXO76031 633 aa12.25□□□□□ -0.45
LIG1-215ENST00000597901 HAND1O96004 215 aa12.25□□□□□ -0.45
LIG1-215ENST00000597901 IGHA1P01876 353 aa12.25□□□□□ -0.45
LIG1-215ENST00000597901 MT-ND2P03891 347 aa12.25□□□□□ -0.45
LIG1-215ENST00000597901 ZNF728P0DKX0 622 aa12.25□□□□□ -0.45
LIG1-215ENST00000597901 PAX6P26367 422 aa12.25□□□□□ -0.45
LIG1-215ENST00000597901 LGALS4P56470 323 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms