RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 CYB5AP00167 134 aa13.79□□□□□ -0.2
SSBP4-204ENST00000597724 C21orf33P30042 268 aaPredicted RBP13.79□□□□□ -0.2
SSBP4-204ENST00000597724 CEBPDP49716 269 aaPredicted RBP13.79□□□□□ -0.2
SSBP4-204ENST00000597724 PDZK1IP1Q13113 114 aa13.79□□□□□ -0.2
SSBP4-204ENST00000597724 DMKNQ6E0U4 476 aaPredicted RBP13.79□□□□□ -0.2
SSBP4-204ENST00000597724 CRIP3Q6Q6R5 217 aa13.79□□□□□ -0.2
SSBP4-204ENST00000597724 RNF144BQ7Z419 303 aa13.79□□□□□ -0.2
SSBP4-204ENST00000597724 PHC2Q8IXK0 858 aa13.79□□□□□ -0.2
SSBP4-204ENST00000597724 SMIM19Q96E16 107 aa13.79□□□□□ -0.2
SSBP4-204ENST00000597724 SPACA5Q96QH8 159 aa13.79□□□□□ -0.2
SSBP4-204ENST00000597724 MS4A7Q9GZW8 240 aaPredicted RBP13.79□□□□□ -0.2
SSBP4-204ENST00000597724 NEK6Q9HC98 313 aa13.79□□□□□ -0.2
SSBP4-204ENST00000597724 OR14J1Q9UGF5 321 aa13.79□□□□□ -0.2
SSBP4-204ENST00000597724 ZNF281Q9Y2X9 895 aa13.79□□□□□ -0.2
SSBP4-204ENST00000597724 SPRY1O43609 319 aaPredicted RBP13.78□□□□□ -0.2
SSBP4-204ENST00000597724 SULT1B1O43704 296 aa13.78□□□□□ -0.2
SSBP4-204ENST00000597724 NPBWR2P48146 333 aa13.78□□□□□ -0.2
SSBP4-204ENST00000597724 SOX2P48431 317 aa13.78□□□□□ -0.2
SSBP4-204ENST00000597724 POU3F4P49335 361 aa13.78□□□□□ -0.2
SSBP4-204ENST00000597724 BPIFB3P59826 476 aa13.78□□□□□ -0.2
SSBP4-204ENST00000597724 RIPK1Q13546 671 aa13.78□□□□□ -0.2
SSBP4-204ENST00000597724 PDCD1Q15116 288 aa13.78□□□□□ -0.2
SSBP4-204ENST00000597724 Q8IYB0 196 aa13.78□□□□□ -0.2
SSBP4-204ENST00000597724 KIR3DL3Q8N743 410 aa13.78□□□□□ -0.2
SSBP4-204ENST00000597724 NANOGP1Q8N7R0 232 aa13.78□□□□□ -0.2
SSBP4-204ENST00000597724 GHSRQ92847 366 aa13.78□□□□□ -0.2
SSBP4-204ENST00000597724 RFT1Q96AA3 541 aa13.78□□□□□ -0.2
SSBP4-204ENST00000597724 JMJD8Q96S16 334 aa13.78□□□□□ -0.2
SSBP4-204ENST00000597724 SEBOXQ9HB31 216 aaPredicted RBP13.78□□□□□ -0.2
SSBP4-204ENST00000597724 ELL3Q9HB65 397 aaPredicted RBP13.78□□□□□ -0.2
SSBP4-204ENST00000597724 ONECUT1Q9UBC0 465 aa13.78□□□□□ -0.2
SSBP4-204ENST00000597724 DNHD1Q96M86 4753 aa13.77□□□□□ -0.2
SSBP4-204ENST00000597724 TRBV23-1A0A0A0MS06 115 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 CENPVL3A0A0U1RRI6 287 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 CD2P06729 351 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 MYF6P23409 242 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 CAPZA1P52907 286 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 GPR157Q5UAW9 335 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 ASPHD2Q6ICH7 369 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 ZNF529Q6P280 563 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 IZUMO2Q6UXV1 221 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 CMTM4Q8IZR5 234 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 Q8N7P7 452 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 SIGLECL1Q8N7X8 197 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 SPATA3Q8NHX4 192 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 ZFAND2BQ8WV99 257 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 EMG1Q92979 244 aaKnown RBP13.77□□□□□ -0.21
SSBP4-204ENST00000597724 TMEM106AQ96A25 262 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 ZNF48Q96MX3 618 aaPredicted RBP13.77□□□□□ -0.21
SSBP4-204ENST00000597724 C19orf24Q9BVV8 132 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 ANKRD60Q9BZ19 345 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 ESM1Q9NQ30 184 aa13.77□□□□□ -0.21
SSBP4-204ENST00000597724 RBFOX1Q9NWB1 397 aaKnown RBP13.77□□□□□ -0.21
SSBP4-204ENST00000597724 SOX21Q9Y651 276 aaPredicted RBP13.77□□□□□ -0.21
SSBP4-204ENST00000597724 IGKV1-12A0A0C4DH73 117 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 PTGES3LE9PB15 166 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 MYL12BO14950 172 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 ANGPTL7O43827 346 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 ATP6V1G2O95670 118 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 IGKV1D-12P01611 117 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 TK1P04183 234 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 CDK1P06493 297 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 CHRM2P08172 466 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 RAB3AP20336 220 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 BCL3P20749 454 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 WNT4P56705 351 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 TAS2R43P59537 309 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 COL10A1Q03692 680 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 KISS1Q15726 138 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 RNLSQ5VYX0 342 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 RBMS3Q6XE24 437 aaKnown RBP13.76□□□□□ -0.21
SSBP4-204ENST00000597724 BRD3OSQ6XYD6 125 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 C1orf122Q6ZSJ8 110 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 VMO1Q7Z5L0 202 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 SAXO1Q8IYX7 474 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 FAM58AQ8N1B3 248 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 ZFP41Q8N8Y5 198 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 ZDHHC22Q8N966 263 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 LHX4Q969G2 390 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 PGLYRP3Q96LB9 341 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 FAM234AQ9H0X4 552 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 SCN3BQ9NY72 215 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 IL36RNQ9UBH0 155 aa13.76□□□□□ -0.21
SSBP4-204ENST00000597724 TRBV5-5A0A0J9YX44 114 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 A0A1W2PQ09 198 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 K7N7A8 449 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 ZNF737O75373 536 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 HCKP08631 526 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 HSPA13P48723 471 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 RPS11P62280 158 aaKnown RBP eCLIP13.75□□□□□ -0.21
SSBP4-204ENST00000597724 DOC2BQ14184 412 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 ZNF146Q15072 292 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 OR51A2Q8NGJ7 313 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 OR5D18Q8NGL1 313 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 OR13C5Q8NGS8 318 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 MYDGFQ969H8 173 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 CDCA4Q9BXL8 241 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 RHOFQ9HBH0 211 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 HMG20AQ9NP66 347 aa13.75□□□□□ -0.21
SSBP4-204ENST00000597724 C19orf12Q9NSK7 152 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms