RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 ZSCAN4Q8NAM6 433 aaPredicted RBP8.79□□□□□ -1
LIG1-210ENST00000596332 C12orf43Q96C57 262 aaKnown RBP8.79□□□□□ -1
LIG1-210ENST00000596332 SDSLQ96GA7 329 aa8.79□□□□□ -1
LIG1-210ENST00000596332 CEP19Q96LK0 163 aa8.79□□□□□ -1
LIG1-210ENST00000596332 GAFA1Q96PS6 74 aa8.79□□□□□ -1
LIG1-210ENST00000596332 CCL13Q99616 98 aa8.79□□□□□ -1
LIG1-210ENST00000596332 CENPOQ9BU64 300 aa8.79□□□□□ -1
LIG1-210ENST00000596332 NAA50Q9GZZ1 169 aaKnown RBP8.79□□□□□ -1
LIG1-210ENST00000596332 HMG20AQ9NP66 347 aa8.79□□□□□ -1
LIG1-210ENST00000596332 RASL12Q9NYN1 266 aa8.79□□□□□ -1
LIG1-210ENST00000596332 NLKQ9UBE8 527 aa8.79□□□□□ -1
LIG1-210ENST00000596332 STUB1Q9UNE7 303 aa8.79□□□□□ -1
LIG1-210ENST00000596332 POLR3KQ9Y2Y1 108 aaPredicted RBP8.79□□□□□ -1
LIG1-210ENST00000596332 TEP1Q99973 2627 aaKnown RBP8.78□□□□□ -1
LIG1-210ENST00000596332 TRAV38-1A0A0B4J264 116 aa8.78□□□□□ -1
LIG1-210ENST00000596332 RFPL4AA6NLU0 287 aa8.78□□□□□ -1
LIG1-210ENST00000596332 A8MXK9 166 aa8.78□□□□□ -1
LIG1-210ENST00000596332 RFPL4AL1F8VTS6 287 aa8.78□□□□□ -1
LIG1-210ENST00000596332 SLC22A1O15245 554 aa8.78□□□□□ -1
LIG1-210ENST00000596332 ZNF737O75373 536 aa8.78□□□□□ -1
LIG1-210ENST00000596332 HCKP08631 526 aa8.78□□□□□ -1
LIG1-210ENST00000596332 CLEC2LP0C7M8 214 aa8.78□□□□□ -1
LIG1-210ENST00000596332 IRF2P14316 349 aa8.78□□□□□ -1
LIG1-210ENST00000596332 CALRP27797 417 aaKnown RBP8.78□□□□□ -1
LIG1-210ENST00000596332 ZNF93P35789 620 aaPredicted RBP8.78□□□□□ -1
LIG1-210ENST00000596332 POU3F4P49335 361 aa8.78□□□□□ -1
LIG1-210ENST00000596332 OR10A3P58181 314 aa8.78□□□□□ -1
LIG1-210ENST00000596332 ZNF146Q15072 292 aa8.78□□□□□ -1
LIG1-210ENST00000596332 Q6P435 159 aa8.78□□□□□ -1
LIG1-210ENST00000596332 BIVMQ86UB2 503 aa8.78□□□□□ -1
LIG1-210ENST00000596332 FAM216BQ8N7L0 139 aa8.78□□□□□ -1
LIG1-210ENST00000596332 OR51T1Q8NGJ9 327 aa8.78□□□□□ -1
LIG1-210ENST00000596332 OR10K1Q8NGX5 313 aa8.78□□□□□ -1
LIG1-210ENST00000596332 TIMD4Q96H15 378 aa8.78□□□□□ -1
LIG1-210ENST00000596332 SHARPINQ9H0F6 387 aa8.78□□□□□ -1
LIG1-210ENST00000596332 MMP26Q9NRE1 261 aa8.78□□□□□ -1
LIG1-210ENST00000596332 IL36GQ9NZH8 169 aa8.78□□□□□ -1
LIG1-210ENST00000596332 POLDIP2Q9Y2S7 368 aa8.78□□□□□ -1
LIG1-210ENST00000596332 AK6Q9Y3D8 172 aaKnown RBP8.78□□□□□ -1
LIG1-210ENST00000596332 TMEM82A0PJX8 343 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 LDLRAD4O15165 306 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 TMEM225BP0DP42 221 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 LMO1P25800 156 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 CFPP27918 469 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 DUSP1P28562 367 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 PRDX2P32119 198 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 PPP3R1P63098 170 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 PLA2G7Q13093 441 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 MICBQ29980 383 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 WDR25Q64LD2 544 aaPredicted RBP8.77□□□□□ -1.01
LIG1-210ENST00000596332 METAP1DQ6UB28 335 aaPredicted RBP8.77□□□□□ -1.01
LIG1-210ENST00000596332 C17orf107Q6ZR85 190 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 C1orf229Q6ZS94 237 aaPredicted RBP8.77□□□□□ -1.01
LIG1-210ENST00000596332 PEG10Q86TG7 708 aaKnown RBP8.77□□□□□ -1.01
LIG1-210ENST00000596332 SATL1Q86VE3 508 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 MKXQ8IYA7 352 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 FAM58AQ8N1B3 248 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 MUC20Q8N307 709 aaPredicted RBP8.77□□□□□ -1.01
LIG1-210ENST00000596332 ZNRF1Q8ND25 227 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 TMEM104Q8NE00 496 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 TNFAIP8L1Q8WVP5 186 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 THRSPQ92748 146 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 GAL3ST1Q99999 423 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 CHCHD6Q9BRQ6 235 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 FUNDC2Q9BWH2 189 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 MRPS26Q9BYN8 205 aaKnown RBP8.77□□□□□ -1.01
LIG1-210ENST00000596332 DNTTIP1Q9H147 329 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 KCNK15Q9H427 330 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 MIOXQ9UGB7 285 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 ARHGAP32A7KAX9 2087 aa8.77□□□□□ -1.01
LIG1-210ENST00000596332 MALRD1Q5VYJ5 2156 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 ISPDA4D126 451 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 MEGF11A6BM72 1044 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 C22orf46C9J442 243 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 DVL1O14640 695 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 SIGLEC5O15389 551 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 PHF1O43189 567 aaPredicted RBP8.76□□□□□ -1.01
LIG1-210ENST00000596332 ADAM20O43506 726 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 NDUFA2O43678 99 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 PSPNO60542 156 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 ARL6IP5O75915 188 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 NXPH2O95156 264 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 KNG1P01042 644 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 AVPP01185 164 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 VSIG8P0DPA2 414 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 CPT2P23786 658 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 CAV3P56539 151 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 FGF12P61328 243 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 UNC119Q13432 240 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 PDCD1Q15116 288 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 CTF1Q16619 201 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 NHLRC3Q5JS37 347 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 SIGIRRQ6IA17 410 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 SPICQ8N5J4 248 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 NEIL1Q96FI4 390 aaPredicted RBP8.76□□□□□ -1.01
LIG1-210ENST00000596332 UQCC2Q9BRT2 126 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 RHOFQ9HBH0 211 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 TCF7L1Q9HCS4 588 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 ABCA1O95477 2261 aa8.76□□□□□ -1.01
LIG1-210ENST00000596332 MTORP42345 2549 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms