RNA–Protein interactions for RNA: ENST00000596136.5

USE1-207, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 1 (best) BASIC

Gene USE1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-207ENST00000596136 NCR3LG1Q68D85 454 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 TMEM200BQ69YZ2 307 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 CRIP3Q6Q6R5 217 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 LHFPL2Q6ZUX7 228 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 MKXQ8IYA7 352 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 DHRSXQ8N5I4 330 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 PARP16Q8N5Y8 322 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 ZNF676Q8N7Q3 588 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 OR5D13Q8NGL4 314 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 TBC1D15Q8TC07 691 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 RPS4Y2Q8TD47 263 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 SSMEM1Q8WWF3 244 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 SLAMF9Q96A28 289 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 OPALINQ96PE5 141 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 SIRT7Q9NRC8 400 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 C19orf12Q9NSK7 152 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 HSPE1-MOB4S4R3N1 261 aa10.69□□□□□ -0.7
USE1-207ENST00000596136 TRBV2A0A0J9YWF9 115 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 A0A0U1RQK1 487 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 A0A1W2PQ09 198 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 IRGMA1A4Y4 181 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 H0YAE9 185 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 IER3P46695 156 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 CAPZA1P52907 286 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 GBX2P52951 348 aaPredicted RBP10.68□□□□□ -0.7
USE1-207ENST00000596136 MTCP1P56278 107 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 RPL15P61313 204 aaKnown RBP10.68□□□□□ -0.7
USE1-207ENST00000596136 RPL31P62899 125 aaKnown RBP10.68□□□□□ -0.7
USE1-207ENST00000596136 COL10A1Q03692 680 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 ACSM1Q08AH1 577 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 PDZK1IP1Q13113 114 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 BLMHQ13867 455 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 ZNF146Q15072 292 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 CCDC58Q4VC31 144 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 HCP5Q6MZN7 132 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 BATF2Q8N1L9 274 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 SETD9Q8NE22 299 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 OR13C3Q8NGS6 347 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 OR5AK2Q8NH90 309 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 CNIH3Q8TBE1 160 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 ZCCHC4Q9H5U6 513 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 OR14J1Q9UGF5 321 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 DIMT1Q9UNQ2 313 aaKnown RBP10.68□□□□□ -0.7
USE1-207ENST00000596136 CAB39Q9Y376 341 aaPredicted RBP10.68□□□□□ -0.7
USE1-207ENST00000596136 NBEAL1Q6ZS30 2694 aa10.68□□□□□ -0.7
USE1-207ENST00000596136 A0A1W2PPH5 198 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 NPFFO15130 113 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 EEF1B2P24534 225 aaKnown RBP10.67□□□□□ -0.7
USE1-207ENST00000596136 NPBWR2P48146 333 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 ETV1P50549 477 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 DLX1P56177 255 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 ZNF529Q6P280 563 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 RPL22L1Q6P5R6 122 aaKnown RBP10.67□□□□□ -0.7
USE1-207ENST00000596136 SERPINA12Q8IW75 414 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 PDZD9Q8IXQ8 264 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 SAXO1Q8IYX7 474 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 FAM58AQ8N1B3 248 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 C3orf56Q8N813 242 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 OR5D14Q8NGL3 314 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 FBLIM1Q8WUP2 373 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 CYGBQ8WWM9 190 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 SNX22Q96L94 193 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 PDCD1LG2Q9BQ51 273 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 ZNF747Q9BV97 191 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 CHIAQ9BZP6 476 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 COMMD4Q9H0A8 199 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 RHOFQ9HBH0 211 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 MMP24Q9Y5R2 645 aa10.67□□□□□ -0.7
USE1-207ENST00000596136 TRRAPQ9Y4A5 3859 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 IGKV1-12A0A0C4DH73 117 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 TMEM82A0PJX8 343 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 FAM181BA6NEQ2 426 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 C17orf98A8MV24 154 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 HAX1O00165 279 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 OGG1O15527 345 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 KDM4BO94953 1096 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 CYB5AP00167 134 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 IGKV1D-12P01611 117 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 FBP1P09467 338 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 BCL3P20749 454 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 CAPGP40121 348 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 GTF2A1P52655 376 aaPredicted RBP10.66□□□□□ -0.7
USE1-207ENST00000596136 DLX6P56179 175 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 KLRD1Q13241 179 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 CDK5R1Q15078 307 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 MIDNQ504T8 468 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 SPIN3Q5JUX0 258 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 LAIR2Q6ISS4 152 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 TMPRSS11AQ6ZMR5 421 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 C17orf107Q6ZR85 190 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 RNF144BQ7Z419 303 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 FAM185AQ8N0U4 392 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 OR8H2Q8N162 312 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 ZSCAN4Q8NAM6 433 aaPredicted RBP10.66□□□□□ -0.7
USE1-207ENST00000596136 ZNF485Q8NCK3 441 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 OR13C9Q8NGT0 318 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 RGP1Q92546 391 aaPredicted RBP10.66□□□□□ -0.7
USE1-207ENST00000596136 DYRK2Q92630 601 aa10.66□□□□□ -0.7
USE1-207ENST00000596136 EMG1Q92979 244 aaKnown RBP10.66□□□□□ -0.7
USE1-207ENST00000596136 AJUBAQ96IF1 538 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms