RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 ZNF222Q9UK12 451 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 FOXJ3Q9UPW0 622 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 ARHGAP32A7KAX9 2087 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 NIPBLQ6KC79 2804 aaeCLIP11.94□□□□□ -0.5
LIG1-208ENST00000595758 WNK2Q9Y3S1 2297 aa11.94□□□□□ -0.5
LIG1-208ENST00000595758 LOC105371242A0A075B767 164 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 IGKV1-12A0A0C4DH73 117 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 A0A1B0GW55 424 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 SIGLEC5O15389 551 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 KNG1P01042 644 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 IGKV1D-12P01611 117 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 DUX4L2P0CJ85 424 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 DUX4L3P0CJ86 424 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 DUX4L4P0CJ87 422 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 DUX4L5P0CJ88 424 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 DUX4L6P0CJ89 424 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 DUX4L7P0CJ90 424 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 BCL3P20749 454 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 GATA3P23771 443 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 PSMA1P25786 263 aaKnown RBP11.93□□□□□ -0.5
LIG1-208ENST00000595758 ZNF93P35789 620 aaPredicted RBP11.93□□□□□ -0.5
LIG1-208ENST00000595758 NPBWR2P48146 333 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 ZP1P60852 638 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 RPS25P62851 125 aaKnown RBP11.93□□□□□ -0.5
LIG1-208ENST00000595758 LRRC10Q5BKY1 277 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 FAM120AOSQ5T036 256 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 CD276Q5ZPR3 534 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 DUX4L9Q6RFH8 374 aaPredicted RBP11.93□□□□□ -0.5
LIG1-208ENST00000595758 FAM58AQ8N1B3 248 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 CD177Q8N6Q3 437 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 TNFAIP8L1Q8WVP5 186 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 ST8SIA4Q92187 359 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 EMG1Q92979 244 aaKnown RBP11.93□□□□□ -0.5
LIG1-208ENST00000595758 SDSLQ96GA7 329 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 GAFA1Q96PS6 74 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 RBFOX1Q9NWB1 397 aaKnown RBP11.93□□□□□ -0.5
LIG1-208ENST00000595758 DUX4Q9UBX2 424 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 OR14J1Q9UGF5 321 aa11.93□□□□□ -0.5
LIG1-208ENST00000595758 DOCK11Q5JSL3 2073 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 MAGEA13PA6NCF6 341 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 J3QLI3 93 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 GABRPO00591 440 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 SC5DO75845 299 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 KDM4BO94953 1096 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 MAS1P04201 325 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 SELLP14151 372 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 HNF1AP20823 631 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 PSMB9P28065 219 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 GABRA5P31644 462 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 PTGFRP43088 359 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 PAX2Q02962 417 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 DGUOKQ16854 277 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 FAM27D1Q5T7N8 215 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 FIP1L1Q6UN15 594 aaKnown RBP11.92□□□□□ -0.5
LIG1-208ENST00000595758 PXT1Q8NFP0 134 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 RAB40AQ8WXH6 277 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 BEX2Q9BXY8 128 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 SHARPINQ9H0F6 387 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 CDC42EP3Q9UKI2 254 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 SF3B6Q9Y3B4 125 aaKnown RBP11.92□□□□□ -0.5
LIG1-208ENST00000595758 MAB21L2Q9Y586 359 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 INSIG2Q9Y5U4 225 aa11.92□□□□□ -0.5
LIG1-208ENST00000595758 IGHV2-70DA0A0C4DH43 119 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 KIR2DS1A0A191URI9 304 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 MEGF11A6BM72 1044 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 C22orf46C9J442 243 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 GPR37O15354 613 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 CRLF1O75462 422 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 FCN3O75636 299 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 RGS9O75916 674 aaPredicted RBP11.91□□□□□ -0.5
LIG1-208ENST00000595758 TNFAIP8O95379 198 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 ECDO95905 644 aaPredicted RBP11.91□□□□□ -0.5
LIG1-208ENST00000595758 UCHL1P09936 223 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 CALCBP10092 127 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 PRKACAP17612 351 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 OR3A4PP47883 348 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 CEBPDP49716 269 aaPredicted RBP11.91□□□□□ -0.5
LIG1-208ENST00000595758 SSX1Q16384 188 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 C11orf91Q3C1V1 193 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 HSD17B12Q53GQ0 312 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 BTNL3Q6UXE8 466 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 TMEM91Q6ZNR0 172 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 BTN2A1Q7KYR7 527 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 C1QL2Q7Z5L3 287 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 FGFRL1Q8N441 504 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 ZNF561Q8N587 486 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 JAGN1Q8N5M9 183 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 PNLDC1Q8NA58 520 aaKnown RBP11.91□□□□□ -0.5
LIG1-208ENST00000595758 ZNRF1Q8ND25 227 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 TMEM185AQ8NFB2 350 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 PHYHIPQ92561 330 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 NKX3-1Q99801 234 aaPredicted RBP11.91□□□□□ -0.5
LIG1-208ENST00000595758 NUDT16L1Q9BRJ7 211 aaKnown RBP11.91□□□□□ -0.5
LIG1-208ENST00000595758 FAM192AQ9GZU8 254 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 PPIL3Q9H2H8 161 aaKnown RBP11.91□□□□□ -0.5
LIG1-208ENST00000595758 C7orf69Q9H7B7 122 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 ELL3Q9HB65 397 aaPredicted RBP11.91□□□□□ -0.5
LIG1-208ENST00000595758 RHOFQ9HBH0 211 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 TCF7L1Q9HCS4 588 aa11.91□□□□□ -0.5
LIG1-208ENST00000595758 HMG20AQ9NP66 347 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms