RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 C21orf33P30042 268 aaPredicted RBP9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 POU3F4P49335 361 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 ATP1B3P54709 279 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 MTCP1P56278 107 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 UBA52P62987 128 aaKnown RBP9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 PRB3Q04118 309 aaPredicted RBP9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 CCDC58Q4VC31 144 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 ZNF529Q6P280 563 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 RPL22L1Q6P5R6 122 aaKnown RBP9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 TMPRSS11AQ6ZMR5 421 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 LHFPL2Q6ZUX7 228 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 AHSA2Q719I0 299 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 VMO1Q7Z5L0 202 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 ZNF561Q8N587 486 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 KIR3DL3Q8N743 410 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 OR13C5Q8NGS8 318 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 OR52N1Q8NH53 320 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 HAVCR2Q8TDQ0 301 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 ZFAND2BQ8WV99 257 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 GATAD2BQ8WXI9 593 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 TNFRSF14Q92956 283 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 RFT1Q96AA3 541 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 SPSB1Q96BD6 273 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 DMRTB1Q96MA1 342 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 MS4A7Q9GZW8 240 aaPredicted RBP9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 COMMD4Q9H0A8 199 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 VCXQ9H320 206 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 ZCCHC4Q9H5U6 513 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 SIRT7Q9NRC8 400 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 C19orf12Q9NSK7 152 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 RBFOX1Q9NWB1 397 aaKnown RBP9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 BABAM2Q9NXR7 383 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 CNOT2Q9NZN8 540 aaKnown RBP9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 ONECUT1Q9UBC0 465 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 OR14J1Q9UGF5 321 aa9.03□□□□□ -0.96
SHKBP1-206ENST00000595523 RNASEK-C17orf49H0YIS7 233 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 H0YJX3 145 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 SULT1B1O43704 296 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 ANGPTL7O43827 346 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 ZNF737O75373 536 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 ALX3O95076 343 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 MYL12AP19105 171 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 BCL3P20749 454 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 SOX2P48431 317 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 ZP1P60852 638 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 RPS11P62280 158 aaKnown RBP eCLIP9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 COL10A1Q03692 680 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 PDZK1IP1Q13113 114 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 PDCD1Q15116 288 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 DEFB112Q30KQ8 113 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 GPR157Q5UAW9 335 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 DMKNQ6E0U4 476 aaPredicted RBP9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 SERPINA12Q8IW75 414 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 PDZD9Q8IXQ8 264 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 ZFP41Q8N8Y5 198 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 BPIFB6Q8NFQ5 453 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 OR51A2Q8NGJ7 313 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 OR5D18Q8NGL1 313 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 FAM216AQ8WUB2 273 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 TSEN15Q8WW01 171 aaKnown RBP9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 SGCDQ92629 289 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 LHX4Q969G2 390 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 SMIM19Q96E16 107 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 PGLYRP3Q96LB9 341 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 DUX5Q96PT3 197 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 PRDM13Q9H4Q3 707 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 DHDHQ9UQ10 334 aa9.02□□□□□ -0.97
SHKBP1-206ENST00000595523 TRBV23-1A0A0A0MS06 115 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 IGHV1-69DA0A0B4J2H0 117 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 TMEM82A0PJX8 343 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 TRIM77I1YAP6 450 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 K7N7A8 449 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 SLC1A7O00341 560 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 IGHV1-69P01742 117 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 TK1P04183 234 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 RPSAP08865 295 aaKnown RBP9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 CALCBP10092 127 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 CAPZA1P52907 286 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 KLRD1Q13241 179 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 HCP5Q6MZN7 132 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 METAP1DQ6UB28 335 aaPredicted RBP9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 C17orf107Q6ZR85 190 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 MKXQ8IYA7 352 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 FAM58AQ8N1B3 248 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 PIP4P2Q8N4L2 257 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 C11orf42Q8N5U0 333 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 OR5D14Q8NGL3 314 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 GPR148Q8TDV2 347 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 EMG1Q92979 244 aaKnown RBP9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 ORAI1Q96D31 301 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 JMJD8Q96S16 334 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 FAM234AQ9H0X4 552 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 UNKLQ9H9P5 680 aaKnown RBP9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 PAK1IP1Q9NWT1 392 aaPredicted RBP9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 TAS2R4Q9NYW5 299 aa9.01□□□□□ -0.97
SHKBP1-206ENST00000595523 TRBV5-5A0A0J9YX44 114 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 A0A1W2PQ09 198 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 M0R1W7 72 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 KDM4BO94953 1096 aa9□□□□□ -0.97
SHKBP1-206ENST00000595523 HAND1O96004 215 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms