RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 BCL3P20749 454 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 NPBWR2P48146 333 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 IL13RA1P78552 427 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 FABP5Q01469 135 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 WDR25Q64LD2 544 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-221ENST00000593026 ZNF841Q6ZN19 808 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 TMEM91Q6ZNR0 172 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 ZNF788Q6ZQV5 615 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 JAGN1Q8N5M9 183 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 NKAIN3Q8N8D7 197 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 TNFAIP8L1Q8WVP5 186 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 PHYHIPQ92561 330 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 EMG1Q92979 244 aaKnown RBP12.43□□□□□ -0.42
DDX39A-221ENST00000593026 MED30Q96HR3 178 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 GAFA1Q96PS6 74 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 NKX3-1Q99801 234 aaPredicted RBP12.43□□□□□ -0.42
DDX39A-221ENST00000593026 SLITRK2Q9H156 845 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 VCX3AQ9NNX9 186 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 RBFOX1Q9NWB1 397 aaKnown RBP12.43□□□□□ -0.42
DDX39A-221ENST00000593026 HIF1ANQ9NWT6 349 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 OR14J1Q9UGF5 321 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 ZNF222Q9UK12 451 aa12.43□□□□□ -0.42
DDX39A-221ENST00000593026 A0A1B0GW55 424 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 KIAA1324LA8MWY0 1029 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-221ENST00000593026 DVL1O14640 695 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 SIGLEC5O15389 551 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 NDUFB3O43676 98 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 ARL6IP5O75915 188 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 KDM4BO94953 1096 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 DUX4L2P0CJ85 424 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 DUX4L3P0CJ86 424 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 DUX4L4P0CJ87 422 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 DUX4L5P0CJ88 424 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 DUX4L6P0CJ89 424 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 DUX4L7P0CJ90 424 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 PTGFRP43088 359 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 OR3A4PP47883 348 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 GP2P55259 537 aaKnown RBP12.42□□□□□ -0.42
DDX39A-221ENST00000593026 IKZF1Q13422 519 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 SYT6Q5T7P8 510 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-221ENST00000593026 DUX4L9Q6RFH8 374 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-221ENST00000593026 FIP1L1Q6UN15 594 aaKnown RBP12.42□□□□□ -0.42
DDX39A-221ENST00000593026 FAM58AQ8N1B3 248 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 PXT1Q8NFP0 134 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 ST8SIA4Q92187 359 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 NR1H4Q96RI1 486 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-221ENST00000593026 PPIL3Q9H2H8 161 aaKnown RBP12.42□□□□□ -0.42
DDX39A-221ENST00000593026 ELL3Q9HB65 397 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-221ENST00000593026 RHOFQ9HBH0 211 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 DUX4Q9UBX2 424 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 POLR3KQ9Y2Y1 108 aaPredicted RBP12.42□□□□□ -0.42
DDX39A-221ENST00000593026 TLN2Q9Y4G6 2542 aa12.42□□□□□ -0.42
DDX39A-221ENST00000593026 PPIAL4CA0A0B4J2A2 164 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 A0A0G2JMP0 313 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 A0A0X1KG70 313 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 MEGF11A6BM72 1044 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 SFTPBP07988 381 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 SELLP14151 372 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 PRKACAP17612 351 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 SRMP19623 302 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 GATA3P23771 443 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 PRDX2P32119 198 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 CEBPDP49716 269 aaPredicted RBP12.41□□□□□ -0.42
DDX39A-221ENST00000593026 RSU1Q15404 277 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 LRRC10Q5BKY1 277 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 DCAF12L2Q5VW00 463 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 CD200R1LQ6Q8B3 271 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 C1QL2Q7Z5L3 287 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 CDH26Q8IXH8 852 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 CD177Q8N6Q3 437 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 OR4M2Q8NGB6 313 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 MUL1Q969V5 352 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 SDSLQ96GA7 329 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 S100A13Q99584 98 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 HMG20AQ9NP66 347 aa12.41□□□□□ -0.42
DDX39A-221ENST00000593026 MALRD1Q5VYJ5 2156 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 NF1P21359 2839 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 LOC105371242A0A075B767 164 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 TRDV1A0A1B0GX56 115 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 INAFM1C9JVW0 142 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 CALCBP10092 127 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 ADRA2CP18825 462 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 GALP22466 123 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 CALRP27797 417 aaKnown RBP12.4□□□□□ -0.42
DDX39A-221ENST00000593026 SNU13P55769 128 aaKnown RBP12.4□□□□□ -0.42
DDX39A-221ENST00000593026 DGUOKQ16854 277 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 SPIN3Q5JUX0 258 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 CD276Q5ZPR3 534 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 FAHD2BQ6P2I3 314 aaPredicted RBP12.4□□□□□ -0.42
DDX39A-221ENST00000593026 LRRTM1Q86UE6 522 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 ZNF561Q8N587 486 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 ZNRF1Q8ND25 227 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 TMEM185AQ8NFB2 350 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 FAHD2AQ96GK7 314 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 METTL9Q9H1A3 318 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 MMP26Q9NRE1 261 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 TMEM160Q9NX00 188 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 IL36RNQ9UBH0 155 aa12.4□□□□□ -0.42
DDX39A-221ENST00000593026 SLC25A10Q9UBX3 287 aaPredicted RBP12.4□□□□□ -0.42
DDX39A-221ENST00000593026 GLS2Q9UI32 602 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms