RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 SMN1Q16637 294 aaKnown RBP16.47■□□□□ 0.23
CIRBP-239ENST00000592467 ZSCAN26Q16670 478 aa16.47■□□□□ 0.23
CIRBP-239ENST00000592467 NCR3LG1Q68D85 454 aa16.47■□□□□ 0.23
CIRBP-239ENST00000592467 OR4M1Q8NGD0 313 aa16.47■□□□□ 0.23
CIRBP-239ENST00000592467 Q96MT0 163 aa16.47■□□□□ 0.23
CIRBP-239ENST00000592467 RDH12Q96NR8 316 aa16.47■□□□□ 0.23
CIRBP-239ENST00000592467 SEBOXQ9HB31 216 aaPredicted RBP16.47■□□□□ 0.23
CIRBP-239ENST00000592467 INPP5EQ9NRR6 644 aa16.47■□□□□ 0.23
CIRBP-239ENST00000592467 SMPD3Q9NY59 655 aaPredicted RBP16.47■□□□□ 0.23
CIRBP-239ENST00000592467 IL36RNQ9UBH0 155 aa16.47■□□□□ 0.23
CIRBP-239ENST00000592467 HHLA2Q9UM44 414 aa16.47■□□□□ 0.23
CIRBP-239ENST00000592467 CMYA5Q8N3K9 4069 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 POM121CA8CG34 1229 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 NDUFA7O95182 113 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 FADS2O95864 444 aaKnown RBP16.46■□□□□ 0.23
CIRBP-239ENST00000592467 LIMS3P0CW19 117 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 LIMS4P0CW20 117 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 AZGP1P25311 298 aaKnown RBP16.46■□□□□ 0.23
CIRBP-239ENST00000592467 NPBWR2P48146 333 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 RBP2P50120 134 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 DLX6P56179 175 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 ERVFRD-1P60508 538 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 ACSM1Q08AH1 577 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 LPCAT4Q643R3 524 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 MKXQ8IYA7 352 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 TBC1D15Q8TC07 691 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 C17orf50Q8WW18 174 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 DYRK2Q92630 601 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 JAM3Q9BX67 310 aa16.46■□□□□ 0.23
CIRBP-239ENST00000592467 FGF20Q9NP95 211 aaPredicted RBP16.46■□□□□ 0.23
CIRBP-239ENST00000592467 IGKV1-12A0A0C4DH73 117 aa16.45■□□□□ 0.22
CIRBP-239ENST00000592467 TMEM82A0PJX8 343 aa16.45■□□□□ 0.22
CIRBP-239ENST00000592467 GPR137BO60478 399 aa16.45■□□□□ 0.22
CIRBP-239ENST00000592467 ZFPL1O95159 310 aa16.45■□□□□ 0.22
CIRBP-239ENST00000592467 IGKV1D-12P01611 117 aa16.45■□□□□ 0.22
CIRBP-239ENST00000592467 MT-ND2P03891 347 aa16.45■□□□□ 0.22
CIRBP-239ENST00000592467 FBP1P09467 338 aa16.45■□□□□ 0.22
CIRBP-239ENST00000592467 CCL3L1P16619 93 aa16.45■□□□□ 0.22
CIRBP-239ENST00000592467 ATP1B3P54709 279 aa16.45■□□□□ 0.22
CIRBP-239ENST00000592467 RPL15P61313 204 aaKnown RBP16.45■□□□□ 0.22
CIRBP-239ENST00000592467 SHISA2Q6UWI4 295 aa16.45■□□□□ 0.22
CIRBP-239ENST00000592467 TCF23Q7RTU1 214 aa16.45■□□□□ 0.22
CIRBP-239ENST00000592467 OR5D13Q8NGL4 314 aa16.45■□□□□ 0.22
CIRBP-239ENST00000592467 RBFOX1Q9NWB1 397 aaKnown RBP16.45■□□□□ 0.22
CIRBP-239ENST00000592467 RPL36Q9Y3U8 105 aaKnown RBP16.45■□□□□ 0.22
CIRBP-239ENST00000592467 H0YAE9 185 aa16.44■□□□□ 0.22
CIRBP-239ENST00000592467 INMTO95050 263 aa16.44■□□□□ 0.22
CIRBP-239ENST00000592467 CLIC3O95833 236 aa16.44■□□□□ 0.22
CIRBP-239ENST00000592467 CHRM2P08172 466 aa16.44■□□□□ 0.22
CIRBP-239ENST00000592467 BCL3P20749 454 aa16.44■□□□□ 0.22
CIRBP-239ENST00000592467 PRKACBP22694 351 aa16.44■□□□□ 0.22
CIRBP-239ENST00000592467 EEF1B2P24534 225 aaKnown RBP16.44■□□□□ 0.22
CIRBP-239ENST00000592467 BLMHQ13867 455 aa16.44■□□□□ 0.22
CIRBP-239ENST00000592467 ZNF691Q5VV52 312 aa16.44■□□□□ 0.22
CIRBP-239ENST00000592467 C17orf107Q6ZR85 190 aa16.44■□□□□ 0.22
CIRBP-239ENST00000592467 SGMS2Q8NHU3 365 aa16.44■□□□□ 0.22
CIRBP-239ENST00000592467 SPSB1Q96BD6 273 aa16.44■□□□□ 0.22
CIRBP-239ENST00000592467 OPALINQ96PE5 141 aa16.44■□□□□ 0.22
CIRBP-239ENST00000592467 FAM96BQ9Y3D0 163 aa16.44■□□□□ 0.22
CIRBP-239ENST00000592467 TRBV2A0A0J9YWF9 115 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 MEIOCA2RUB1 952 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 C17orf98A8MV24 154 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 ZNF20P17024 532 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 RAG2P55895 527 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 MTCP1P56278 107 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 PDZK1IP1Q13113 114 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 ZNF146Q15072 292 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 ASPHD2Q6ICH7 369 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 LHFPL2Q6ZUX7 228 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 ZNF676Q8N7Q3 588 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 OR52N4Q8NGI2 321 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 OR13C3Q8NGS6 347 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 RPS4Y2Q8TD47 263 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 RGP1Q92546 391 aaPredicted RBP16.43■□□□□ 0.22
CIRBP-239ENST00000592467 EMG1Q92979 244 aaKnown RBP16.43■□□□□ 0.22
CIRBP-239ENST00000592467 STMN2Q93045 179 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 MRPL48Q96GC5 212 aaKnown RBP16.43■□□□□ 0.22
CIRBP-239ENST00000592467 PDCD1LG2Q9BQ51 273 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 SLITRK2Q9H156 845 aa16.43■□□□□ 0.22
CIRBP-239ENST00000592467 CAB39Q9Y376 341 aaPredicted RBP16.43■□□□□ 0.22
CIRBP-239ENST00000592467 SPRY1O43609 319 aaPredicted RBP16.42■□□□□ 0.22
CIRBP-239ENST00000592467 PSPNO60542 156 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 HAND1O96004 215 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 POU3F4P49335 361 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 GTF2A1P52655 376 aaPredicted RBP16.42■□□□□ 0.22
CIRBP-239ENST00000592467 ADARB1P78563 741 aaKnown RBP16.42■□□□□ 0.22
CIRBP-239ENST00000592467 MIDNQ504T8 468 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 KLHL22Q53GT1 634 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 XAF1Q6GPH4 301 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 Q8IYB0 196 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 OR8H2Q8N162 312 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 PARP16Q8N5Y8 322 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 ASCC1Q8N9N2 400 aaKnown RBP16.42■□□□□ 0.22
CIRBP-239ENST00000592467 BEND2Q8NDZ0 799 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 ZNF555Q8NEP9 628 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 OR13C9Q8NGT0 318 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 CNIH3Q8TBE1 160 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 RFT1Q96AA3 541 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 SNX22Q96L94 193 aa16.42■□□□□ 0.22
CIRBP-239ENST00000592467 SPACA5Q96QH8 159 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms