RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 LIME1Q9H400 295 aa13.58□□□□□ -0.24
MBD1-227ENST00000592060 LDAHQ9H6V9 325 aa13.58□□□□□ -0.24
MBD1-227ENST00000592060 CHMP1AQ9HD42 196 aaPredicted RBP13.58□□□□□ -0.24
MBD1-227ENST00000592060 CSAG2Q9Y5P2 127 aa13.58□□□□□ -0.24
MBD1-227ENST00000592060 C13orf42A0A1B0GVH6 325 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 ADAP1O75689 374 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 IL18BPO95998 194 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 CST4P01036 141 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 PGAM2P15259 253 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 PSMB6P28072 239 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 SLC25A26Q70HW3 274 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 TMPRSS7Q7RTY8 843 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 MRPL21Q7Z2W9 205 aaKnown RBP13.57□□□□□ -0.24
MBD1-227ENST00000592060 VASH2Q86V25 355 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 OR1K1Q8NGR3 316 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 POM121Q96HA1 1249 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 DMRTA2Q96SC8 542 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 ASCL3Q9NQ33 180 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 PCDHB16Q9NRJ7 776 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 C14orf166Q9Y224 244 aaKnown RBP13.57□□□□□ -0.24
MBD1-227ENST00000592060 STARD10Q9Y365 291 aa13.57□□□□□ -0.24
MBD1-227ENST00000592060 SPAARA0A1B0GVQ0 90 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 KANTRA0A1W2PQU2 76 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 I3L521 148 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 PDGFAP04085 211 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 CTSDP07339 412 aaPredicted RBP13.56□□□□□ -0.24
MBD1-227ENST00000592060 OPRM1P35372 400 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 TNFSF10P50591 281 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 CYCSP99999 105 aaKnown RBP13.56□□□□□ -0.24
MBD1-227ENST00000592060 MALLQ13021 153 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 SRSF6Q13247 344 aaKnown RBP13.56□□□□□ -0.24
MBD1-227ENST00000592060 Q6ZPA2 131 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 MARS2Q96GW9 593 aaKnown RBP13.56□□□□□ -0.24
MBD1-227ENST00000592060 C12orf49Q9H741 205 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 SLC22A20A6NK97 555 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 POM121CA8CG34 1229 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 SHOXO15266 292 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 NGFP01138 241 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 OR5H8P0DN80 308 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 PMELP40967 661 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 NPBWR2P48146 333 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 BRICD5Q6PL45 260 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 CCDC28AQ8IWP9 274 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 SAXO1Q8IYX7 474 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 BCL2L2Q92843 193 aaPredicted RBP13.56□□□□□ -0.24
MBD1-227ENST00000592060 RNF126Q9BV68 326 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 GP6Q9HCN6 339 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 NECAP2Q9NVZ3 263 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 ZNF175Q9Y473 711 aa13.56□□□□□ -0.24
MBD1-227ENST00000592060 MFSD2BA6NFX1 497 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 MPTX1A8MV57 137 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 H0YIZ8 118 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 NKX2-8O15522 239 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 LYL1P12980 280 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 ZNF250P15622 560 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 WNT5AP41221 380 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 PMP22Q01453 160 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 HIKESHIQ53FT3 197 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 FBXW9Q5XUX1 488 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 ELP2Q6IA86 826 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 DHRS11Q6UWP2 260 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 DPPA2Q7Z7J5 298 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 ZDHHC23Q8IYP9 409 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 POC1AQ8NBT0 407 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 RBPMSQ93062 196 aaKnown RBP13.55□□□□□ -0.24
MBD1-227ENST00000592060 DHRS9Q9BPW9 319 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 OPA3Q9H6K4 179 aa13.55□□□□□ -0.24
MBD1-227ENST00000592060 FAM90A10PA6NDY2 464 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FAM90A18PA6NE21 464 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FAM90A16PA6NEW6 464 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FAM90A20PA6NIJ5 464 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 CRYM-AS1A6NIL9 109 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FAM90A8PA6NJQ4 464 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FAM90A7PA6NKC0 464 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FAM90A22PA8MWA6 464 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FAM90A12PA8MX19 464 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FAM90A5PA8MXJ8 464 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FAM90A23PA8MXZ1 464 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FAM90A15PP0C7V4 464 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FAM90A13PP0C7W8 464 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FAM90A14PP0C7W9 464 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FAM90A24PP0C7X0 464 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FUT3P21217 361 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 PLP2Q04941 152 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 PDCD1Q15116 288 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 CEACAM21Q3KPI0 293 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 BEX5Q5H9J7 111 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 OR1S1Q8NH92 325 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 OR10C1Q96KK4 312 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 ZNF75AQ96N20 296 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 FAM221AA4D161 298 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 KNG1P01042 644 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 IFNA2P01563 188 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 BCL3P20749 454 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 LUMP51884 338 aaPredicted RBP13.54□□□□□ -0.24
MBD1-227ENST00000592060 IL15RAQ13261 267 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 SLC22A25Q6T423 547 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 TMEM200AQ86VY9 491 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 SLAMF9Q96A28 289 aa13.54□□□□□ -0.24
MBD1-227ENST00000592060 C2orf50Q96LR7 162 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms