RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 HEXAP06865 529 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 SFTPBP07988 381 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 CLEC2LP0C7M8 214 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 SERPINA2P20848 420 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 CTF1Q16619 201 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 SLC22A6Q4U2R8 563 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 HES5Q5TA89 166 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 WFDC11Q8NEX6 87 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 OR10K1Q8NGX5 313 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 TBC1D15Q8TC07 691 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 SEH1LQ96EE3 360 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 TMEM246Q9BRR3 403 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 NARFLQ9H6Q4 476 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 HMG20AQ9NP66 347 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 GLS2Q9UI32 602 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 AKAP9Q99996 3911 aa11.41□□□□□ -0.58
VMP1-210ENST00000589823 NKX6-3A6NJ46 265 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 OR2AT4A6NND4 320 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 F8VVB4 439 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 F8VWA3 439 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 AIPO00170 330 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 CALCBP10092 127 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 PSG2P11465 335 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 ARSBP15848 533 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 USF1P22415 310 aaPredicted RBP11.4□□□□□ -0.58
VMP1-210ENST00000589823 GABRA2P47869 451 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 CAPZA1P52907 286 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 SNU13P55769 128 aaKnown RBP11.4□□□□□ -0.58
VMP1-210ENST00000589823 CAV3P56539 151 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 FGF12P61328 243 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 P2RY14Q15391 338 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 DGUOKQ16854 277 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 STUMQ69YW2 141 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 ELP2Q6IA86 826 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 FAM166AQ6J272 317 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 SFXN4Q6P4A7 337 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 DCDC5Q6ZRR9 648 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 USP43Q70EL4 1123 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 CROCCP3Q8IVE0 287 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 OSR2Q8N2R0 312 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 OR5T2Q8NGG2 359 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 CLDND2Q8NHS1 167 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 REG4Q9BYZ8 158 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 CST11Q9H112 138 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 MIOXQ9UGB7 285 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 OR14J1Q9UGF5 321 aa11.4□□□□□ -0.58
VMP1-210ENST00000589823 SETXQ7Z333 2677 aaKnown RBP11.4□□□□□ -0.59
VMP1-210ENST00000589823 IGHV4-61A0A0C4DH41 118 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 A0A0G2JK05 382 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 RFPL4AA6NLU0 287 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 CYSRT1A8MQ03 144 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 CEACAM18A8MTB9 384 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 RNF223E7ERA6 249 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 RFPL4AL1F8VTS6 287 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 ADAM20O43506 726 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 CRTAPO75718 401 aaPredicted RBP11.39□□□□□ -0.59
VMP1-210ENST00000589823 BPNT1O95861 308 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 GTF2F2P13984 249 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 RPS2P15880 293 aaKnown RBP11.39□□□□□ -0.59
VMP1-210ENST00000589823 CFPP27918 469 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 RPS19P39019 145 aaKnown RBP11.39□□□□□ -0.59
VMP1-210ENST00000589823 CLDN12P56749 244 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 SPIN3Q5JUX0 258 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 SLC36A1Q7Z2H8 476 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 NR2C2APQ86WQ0 139 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 CCDC168Q8NDH2 2452 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 Q8NFD4 153 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 ANGPTL6Q8NI99 470 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 SLC25A28Q96A46 364 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 FAM3DQ96BQ1 224 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 ISOC1Q96CN7 298 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 RAB39BQ96DA2 213 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 MRPS24Q96EL2 167 aaKnown RBP11.39□□□□□ -0.59
VMP1-210ENST00000589823 DNTTIP1Q9H147 329 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 DCSTAMPQ9H295 470 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 PATZ1Q9HBE1 687 aaKnown RBP11.39□□□□□ -0.59
VMP1-210ENST00000589823 NDUFA13Q9P0J0 144 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 DAPK2Q9UIK4 370 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 CEPT1Q9Y6K0 416 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 VPS13CQ709C8 3753 aa11.39□□□□□ -0.59
VMP1-210ENST00000589823 IGKV1D-17A0A075B6S4 117 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 SMIM31A0A1B0GVY4 71 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 SH2D1BO14796 132 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 TMPRSS2O15393 492 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 TMEM127O75204 238 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 SLC2A2P11168 524 aaPredicted RBP11.38□□□□□ -0.59
VMP1-210ENST00000589823 CPT2P23786 658 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 PRDX2P32119 198 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 LOXL1Q08397 574 aaPredicted RBP11.38□□□□□ -0.59
VMP1-210ENST00000589823 ZNF146Q15072 292 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 ATPAF1Q5TC12 328 aaPredicted RBP11.38□□□□□ -0.59
VMP1-210ENST00000589823 NLRC3Q7RTR2 1065 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 OR51D1Q8NGF3 324 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 OR8B3Q8NGG8 313 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 OR51T1Q8NGJ9 327 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 KCNG3Q8TAE7 436 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 NDNFQ8TB73 568 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 NEIL1Q96FI4 390 aaPredicted RBP11.38□□□□□ -0.59
VMP1-210ENST00000589823 MED30Q96HR3 178 aa11.38□□□□□ -0.59
VMP1-210ENST00000589823 OR8B2Q96RD0 313 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms