RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 FAM234AQ9H0X4 552 aa11.74□□□□□ -0.53
MBD1-220ENST00000589758 VCX3BQ9H321 246 aa11.74□□□□□ -0.53
MBD1-220ENST00000589758 ERVK13-1Q9NX77 482 aa11.74□□□□□ -0.53
MBD1-220ENST00000589758 hCG_1809904A0A1W2PP81 198 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 A0A1W2PPE2 198 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 A0A1W2PR64 198 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 A0A1W2PRV1 198 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 A6NIN4 97 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 PRDX2P32119 198 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 GALEQ14376 348 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 PRSS35Q8N3Z0 413 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 PNKDQ8N490 385 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 BEND2Q8NDZ0 799 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 TFAP2CQ92754 450 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 MRPL48Q96GC5 212 aaKnown RBP11.73□□□□□ -0.53
MBD1-220ENST00000589758 MMP27Q9H306 513 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 HEXA-AS1Q9H8Q6 139 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 ISG20L2Q9H9L3 353 aaKnown RBP11.73□□□□□ -0.53
MBD1-220ENST00000589758 ELL3Q9HB65 397 aaPredicted RBP11.73□□□□□ -0.53
MBD1-220ENST00000589758 TCF7L1Q9HCS4 588 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 GPR173Q9NS66 373 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 HSPE1-MOB4S4R3N1 261 aa11.73□□□□□ -0.53
MBD1-220ENST00000589758 TRRAPQ9Y4A5 3859 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 A0A1B0GTI1 187 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 PQLC2LA1A4F0 135 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 ANKRD61A6NGH8 418 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 SYNGR1O43759 233 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 NXPH2O95156 264 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 IGHA1P01876 353 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 HTR1AP08908 422 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 CCL1P22362 96 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 KIR3DL2P43630 455 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 KRTAP10-3P60369 221 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 ACTA2P62736 377 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 RPL31P62899 125 aaKnown RBP11.72□□□□□ -0.53
MBD1-220ENST00000589758 ACTG2P63267 376 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 DEFA6Q01524 100 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 RIPK1Q13546 671 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 IZUMO2Q6UXV1 221 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 KCTD20Q7Z5Y7 419 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 RDH10Q8IZV5 341 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 CD177Q8N6Q3 437 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 BPIFB6Q8NFQ5 453 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 ZNF488Q96MN9 340 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 MEGF9Q9H1U4 602 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 PLEKHA1Q9HB21 404 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 FGF20Q9NP95 211 aaPredicted RBP11.72□□□□□ -0.53
MBD1-220ENST00000589758 INPP5EQ9NRR6 644 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 C19orf12Q9NSK7 152 aa11.72□□□□□ -0.53
MBD1-220ENST00000589758 MRPS18AQ9NVS2 196 aaKnown RBP11.72□□□□□ -0.53
MBD1-220ENST00000589758 RRP15Q9Y3B9 282 aaKnown RBP11.72□□□□□ -0.53
MBD1-220ENST00000589758 IRGMA1A4Y4 181 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 H0YJX3 145 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 SYT7O43581 403 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 ANGPTL7O43827 346 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 XPNPEP2O43895 674 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 MPZP25189 248 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 ETV1P50549 477 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 AANATQ16613 207 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 ASPHD2Q6ICH7 369 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 LAIR2Q6ISS4 152 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 HCP5Q6MZN7 132 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 CALHM1Q8IU99 346 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 CCDC54Q8NEL0 328 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 OR2G2Q8NGZ5 317 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 GGHQ92820 318 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 RNF166Q96A37 237 aaPredicted RBP11.71□□□□□ -0.53
MBD1-220ENST00000589758 PELI1Q96FA3 418 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 MYCBPQ99417 103 aaPredicted RBP11.71□□□□□ -0.53
MBD1-220ENST00000589758 SSX3Q99909 188 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 NRIP2Q9BQI9 281 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 ZNF649Q9BS31 505 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 PKIBQ9C010 78 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 HES4Q9HCC6 221 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 FRRS1LQ9P0K9 344 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 FBLN5Q9UBX5 448 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 SLC7A11Q9UPY5 501 aa11.71□□□□□ -0.53
MBD1-220ENST00000589758 TK1P04183 234 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 LIMS3P0CW19 117 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 LIMS4P0CW20 117 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 DCKP27707 260 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 NANOS3P60323 173 aaKnown RBP11.7□□□□□ -0.54
MBD1-220ENST00000589758 IL24Q13007 206 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 LRRC75BQ2VPJ9 315 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 PDLIM3Q53GG5 364 aaPredicted RBP11.7□□□□□ -0.54
MBD1-220ENST00000589758 OR2G6Q5TZ20 316 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 TMEM200BQ69YZ2 307 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 SLC35E4Q6ICL7 350 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 AHSA2Q719I0 299 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 MKXQ8IYA7 352 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 SYS1Q8N2H4 156 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 DTX3Q8N9I9 347 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 TMEM80Q96HE8 168 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 PPA2Q9H2U2 334 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 RAB18Q9NP72 206 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 OR14J1Q9UGF5 321 aa11.7□□□□□ -0.54
MBD1-220ENST00000589758 LOC107986453A0A1B0GWG9 222 aa11.69□□□□□ -0.54
MBD1-220ENST00000589758 E9PI62 339 aa11.69□□□□□ -0.54
MBD1-220ENST00000589758 H3BUX3 64 aa11.69□□□□□ -0.54
MBD1-220ENST00000589758 GATBO75879 557 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms