RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 FDCSPQ8NFU4 85 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 OR5AP2Q8NGF4 316 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 APOBEC3DQ96AK3 386 aaPredicted RBP8.61□□□□□ -1.03
VPS25-202ENST00000589219 PSMG3-AS1Q96PY0 264 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 PDCD10Q9BUL8 212 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 LDAHQ9H6V9 325 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 OSGIN2Q9Y236 505 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 AUP1Q9Y679 476 aa8.61□□□□□ -1.03
VPS25-202ENST00000589219 IGKV1-27A0A075B6S5 117 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 TRAV14DV4A0A0A6YYC5 116 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 RPS10-NUDT3A0A1W2PQS6 291 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 SLC22A20A6NK97 555 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 PRSS44E7EML9 344 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 J3QW42 95 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 TPD52L2O43399 206 aaKnown RBP8.6□□□□□ -1.03
VPS25-202ENST00000589219 SS18L1O75177 396 aaPredicted RBP8.6□□□□□ -1.03
VPS25-202ENST00000589219 IGHV3-9P01782 118 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 GABRR1P24046 479 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 CHATP28329 748 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 MPGP29372 298 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 UBA52P62987 128 aaKnown RBP8.6□□□□□ -1.03
VPS25-202ENST00000589219 SORDQ00796 357 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 PLP2Q04941 152 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 C6orf183Q5T699 404 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 C3P1Q6ZMU1 363 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 MOB3CQ70IA8 216 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 TMUB2Q71RG4 321 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 MRPL21Q7Z2W9 205 aaKnown RBP8.6□□□□□ -1.03
VPS25-202ENST00000589219 PNPLA5Q7Z6Z6 429 aaPredicted RBP8.6□□□□□ -1.03
VPS25-202ENST00000589219 SAXO1Q8IYX7 474 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 OSR2Q8N2R0 312 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 CPEB3Q8NE35 698 aaKnown RBP8.6□□□□□ -1.03
VPS25-202ENST00000589219 OR13G1Q8NGZ3 307 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 COQ8AQ8NI60 647 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 MARCH1Q8TCQ1 289 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 WDYHV1Q96HA8 205 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 DHRS9Q9BPW9 319 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 GLRX2Q9NS18 164 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 ZNF701Q9NV72 531 aaPredicted RBP8.6□□□□□ -1.03
VPS25-202ENST00000589219 PLEKHJ1Q9NW61 149 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 EHFQ9NZC4 300 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 KIF25Q9UIL4 384 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 GPR132Q9UNW8 380 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 LIPGQ9Y5X9 500 aa8.6□□□□□ -1.03
VPS25-202ENST00000589219 USP9YO00507 2555 aaPredicted RBP8.6□□□□□ -1.03
VPS25-202ENST00000589219 SHANK1Q9Y566 2161 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 SPENQ96T58 3664 aaKnown RBP8.59□□□□□ -1.03
VPS25-202ENST00000589219 LOC100509620A0A075B734 347 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 A0A0D9SG52 128 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 DBX1A6NMT0 343 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 SPRY1O43609 319 aaPredicted RBP8.59□□□□□ -1.03
VPS25-202ENST00000589219 PDCD6O75340 191 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 OR2F2O95006 317 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 SFT2D2O95562 160 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 CST4P01036 141 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 IGHG3P01860 377 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 GNLYP22749 145 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 VAMP1P23763 118 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 TNFSF10P50591 281 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 ARPC4P59998 168 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 CYCSP99999 105 aaKnown RBP8.59□□□□□ -1.03
VPS25-202ENST00000589219 PDZK1IP1Q13113 114 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 OR2F1Q13607 317 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 PLEKHN1Q494U1 663 aaPredicted RBP8.59□□□□□ -1.03
VPS25-202ENST00000589219 NKAPLQ5M9Q1 402 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 IGFL2Q6UWQ7 119 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 GSG1LQ6UXU4 331 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 RFPL4BQ6ZWI9 263 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 OVCH2Q7RTZ1 564 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 ZDHHC23Q8IYP9 409 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 OR8H3Q8N146 312 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 OR56B2PQ8NGI1 322 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 OR1K1Q8NGR3 316 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 CMSS1Q9BQ75 279 aaKnown RBP8.59□□□□□ -1.03
VPS25-202ENST00000589219 REPIN1Q9BWE0 567 aaKnown RBP8.59□□□□□ -1.03
VPS25-202ENST00000589219 MFFQ9GZY8 342 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 ARL6Q9H0F7 186 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 ZNF552Q9H707 407 aaPredicted RBP8.59□□□□□ -1.03
VPS25-202ENST00000589219 FN3KRPQ9HA64 309 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 RAB18Q9NP72 206 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 SPRR3Q9UBC9 169 aa8.59□□□□□ -1.03
VPS25-202ENST00000589219 C14orf166Q9Y224 244 aaKnown RBP8.59□□□□□ -1.03
VPS25-202ENST00000589219 SPTBN1Q01082 2364 aaKnown RBP8.58□□□□□ -1.04
VPS25-202ENST00000589219 USP9XQ93008 2570 aaPredicted RBP8.58□□□□□ -1.04
VPS25-202ENST00000589219 A0A096LPE4 126 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 A0A1W2PPZ6 126 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 PQLC2LA1A4F0 135 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 C5orf49A4QMS7 147 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 OR5H14A6NHG9 310 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 ANGPTL7O43827 346 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 HLA-HP01893 362 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 CD79AP11912 226 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 AKR1C4P17516 323 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 APLNRP35414 380 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 UQCRFS1P47985 274 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 NPY4RP50391 375 aa8.58□□□□□ -1.04
VPS25-202ENST00000589219 AP2S1P53680 142 aaPredicted RBP8.58□□□□□ -1.04
VPS25-202ENST00000589219 RBM11P57052 281 aaKnown RBP8.58□□□□□ -1.04
VPS25-202ENST00000589219 HLXQ14774 488 aaPredicted RBP8.58□□□□□ -1.04
VPS25-202ENST00000589219 C3AR1Q16581 482 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms