RNA–Protein interactions for RNA: ENST00000589104.5

KDM4B-208, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,470 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-208ENST00000589104 OR8U1Q8NH10 309 aa11.65□□□□□ -0.55
KDM4B-208ENST00000589104 ABHD14BQ96IU4 210 aa11.65□□□□□ -0.55
KDM4B-208ENST00000589104 NCOA6Q14686 2063 aaPredicted RBP11.64□□□□□ -0.55
KDM4B-208ENST00000589104 CD80P33681 288 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 NTF4P34130 210 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 SNU13P55769 128 aaKnown RBP11.64□□□□□ -0.55
KDM4B-208ENST00000589104 PCOLCEQ15113 449 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 SPSB3Q6PJ21 355 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 COLCA1Q6ZS62 124 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 CPNE4Q96A23 557 aaPredicted RBP11.64□□□□□ -0.55
KDM4B-208ENST00000589104 EMC6Q9BV81 110 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 C1orf123Q9NWV4 160 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 FBXL17Q9UF56 701 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 ANXA10Q9UJ72 324 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 ACKR3P25106 362 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 OR8B8Q15620 311 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 REC114Q7Z4M0 266 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 PRSS58Q8IYP2 241 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 ADGRG7Q96K78 797 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 TMEM56Q96MV1 263 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 PRRX2Q99811 253 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 OPA3Q9H6K4 179 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 ZNF581Q9P0T4 197 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 RCL1Q9Y2P8 373 aaKnown RBP11.64□□□□□ -0.55
KDM4B-208ENST00000589104 TMEM56-RWDD3S4R434 201 aa11.64□□□□□ -0.55
KDM4B-208ENST00000589104 SHISA8B8ZZ34 492 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 ZIC3O60481 467 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 NME2P22392 152 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 CSNK1A1P48729 337 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 GPR157Q5UAW9 335 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 FAM27BQ5VT28 67 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 UEVLDQ8IX04 471 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 OR5H2Q8NGV7 314 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 MOB3AQ96BX8 217 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 KIRREL1Q96J84 757 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 AKR1E2Q96JD6 320 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 IGKV1-12A0A0C4DH73 117 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 IFITM10A6NMD0 228 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 DNPH1O43598 174 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 NUDT14O95848 222 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 IGKV1D-12P01611 117 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 GNG10P50151 68 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 HNRNPKP61978 463 aaKnown RBP eCLIP11.63□□□□□ -0.558e-8■■■■□ 19.3
KDM4B-208ENST00000589104 KIAA0141Q14154 515 aaPredicted RBP11.63□□□□□ -0.55
KDM4B-208ENST00000589104 ZNF248Q8NDW4 579 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 THOC3Q96J01 351 aaKnown RBP11.63□□□□□ -0.55
KDM4B-208ENST00000589104 IMMP1LQ96LU5 166 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 IP6K3Q96PC2 410 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 WDR54Q9H977 334 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 SPTBP11277 2137 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 CYTIPO60759 359 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 CSN2P05814 226 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 AIMP2Q13155 320 aaKnown RBP11.63□□□□□ -0.55
KDM4B-208ENST00000589104 RAB30Q15771 203 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 DEFB133Q30KQ1 61 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 GGNBP1Q5YKI7 109 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.63□□□□□ -0.55
KDM4B-208ENST00000589104 DNAJA3Q96EY1 480 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 REPIN1Q9BWE0 567 aaKnown RBP11.63□□□□□ -0.55
KDM4B-208ENST00000589104 BANF2Q9H503 90 aa11.63□□□□□ -0.55
KDM4B-208ENST00000589104 FAM212BQ9NTI7 297 aaPredicted RBP11.63□□□□□ -0.55
KDM4B-208ENST00000589104 TSTD3H0UI37 97 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 HCKP08631 526 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 RPL12P30050 165 aaKnown RBP11.62□□□□□ -0.55
KDM4B-208ENST00000589104 RPS10P46783 165 aaKnown RBP11.62□□□□□ -0.55
KDM4B-208ENST00000589104 RAB5CP51148 216 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 TMEM33P57088 247 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 OR10G3Q8NGC4 313 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 PARP12Q9H0J9 701 aaKnown RBP11.62□□□□□ -0.55
KDM4B-208ENST00000589104 SOHLH2Q9NX45 425 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 KPTNQ9Y664 436 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 KIAA0100Q14667 2235 aaKnown RBP11.62□□□□□ -0.55
KDM4B-208ENST00000589104 FOXL2P58012 376 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 MRPS34P82930 218 aaKnown RBP11.62□□□□□ -0.55
KDM4B-208ENST00000589104 DNLZQ5SXM8 178 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 KCTD9Q7L273 389 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 OR10G4Q8NGN3 311 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 MRPL24Q96A35 216 aaKnown RBP11.62□□□□□ -0.55
KDM4B-208ENST00000589104 SPSB1Q96BD6 273 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 RIMS4Q9H426 269 aaPredicted RBP11.62□□□□□ -0.55
KDM4B-208ENST00000589104 NAA60Q9H7X0 242 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 BCAT2O15382 392 aaPredicted RBP11.62□□□□□ -0.55
KDM4B-208ENST00000589104 DUX1O43812 170 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 QDPRP09417 244 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 PPM1FP49593 454 aaPredicted RBP11.62□□□□□ -0.55
KDM4B-208ENST00000589104 PMS2P11Q13670 270 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 IL13RA2Q14627 380 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 SNAI3Q3KNW1 292 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 ABLIM2Q6H8Q1 611 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 KLHL24Q6TFL4 600 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 LIN37Q96GY3 246 aaPredicted RBP11.62□□□□□ -0.55
KDM4B-208ENST00000589104 RASL10BQ96S79 203 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 NEU1Q99519 415 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 URM1Q9BTM9 101 aaKnown RBP11.62□□□□□ -0.55
KDM4B-208ENST00000589104 ZNF700Q9H0M5 742 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 GAR1Q9NY12 217 aaKnown RBP11.62□□□□□ -0.55
KDM4B-208ENST00000589104 MTCH2Q9Y6C9 303 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 PTPRBP23467 1997 aa11.62□□□□□ -0.55
KDM4B-208ENST00000589104 SRFP11831 508 aa11.61□□□□□ -0.55
KDM4B-208ENST00000589104 ZNF25P17030 456 aaPredicted RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms