RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 DUX4Q9UBX2 424 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 MIOXQ9UGB7 285 aa15.83■□□□□ 0.12
CLPTM1-209ENST00000588855 TLN2Q9Y4G6 2542 aa15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 IGKV1D-17A0A075B6S4 117 aa15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 CDRT1O95170 752 aa15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 WNT2P09544 360 aa15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 CEBPDP49716 269 aaPredicted RBP15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 KRTAP1-1Q07627 177 aa15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 CDH26Q8IXH8 852 aa15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 OR4D6Q8NGJ1 314 aa15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 OR13F1Q8NGS4 319 aa15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 OR10K1Q8NGX5 313 aa15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 NEIL1Q96FI4 390 aaPredicted RBP15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 SMR3AQ99954 134 aa15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 ELL3Q9HB65 397 aaPredicted RBP15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 ZNF222Q9UK12 451 aa15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 ING4Q9UNL4 249 aa15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 AK6Q9Y3D8 172 aaKnown RBP15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 CSPG4Q6UVK1 2322 aa15.82■□□□□ 0.12
CLPTM1-209ENST00000588855 ARHGAP32A7KAX9 2087 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 LOC100506127A0A0U1RQW1 187 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 RFPL4AA6NLU0 287 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 RFPL4AL1F8VTS6 287 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 TMPRSS2O15393 492 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 NDUFA2O43678 99 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 TFAP2AP05549 437 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 FOSL1P15407 271 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 PRKACAP17612 351 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 MYL9P24844 172 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 GABRA2P47869 451 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 SNU13P55769 128 aaKnown RBP15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 GLT8D1Q68CQ7 371 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 FAM58AQ8N1B3 248 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 FAM216BQ8N7L0 139 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 OR8B3Q8NGG8 313 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 C1orf159Q96HA4 380 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 GAFA1Q96PS6 74 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 OR8B2Q96RD0 313 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 UQCC2Q9BRT2 126 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 RNF167Q9H6Y7 350 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 LPAR2Q9HBW0 351 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 OR14J1Q9UGF5 321 aa15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 MRPS28Q9Y2Q9 187 aaKnown RBP15.81■□□□□ 0.12
CLPTM1-209ENST00000588855 TRAV1-2A0A0B4J238 106 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 NKX6-3A6NJ46 265 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 FCN3O75636 299 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 KNG1P01042 644 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 SELLP14151 372 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 ALDH3B2P48448 385 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 GZMKP49863 264 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 ATPAF1Q5TC12 328 aaPredicted RBP15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 ASCL4Q6XD76 172 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 ZNF788Q6ZQV5 615 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 NLRC3Q7RTR2 1065 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 CD177Q8N6Q3 437 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 MSI2Q96DH6 328 aaKnown RBP15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 CENPOQ9BU64 300 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 HMG20AQ9NP66 347 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 KAAG1Q9UBP8 84 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 GSTK1Q9Y2Q3 226 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 MALRD1Q5VYJ5 2156 aa15.8■□□□□ 0.12
CLPTM1-209ENST00000588855 ZNF16P17020 682 aaPredicted RBP15.79■□□□□ 0.12
CLPTM1-209ENST00000588855 PITPNBP48739 271 aa15.79■□□□□ 0.12
CLPTM1-209ENST00000588855 RSU1Q15404 277 aa15.79■□□□□ 0.12
CLPTM1-209ENST00000588855 ESCO2Q56NI9 601 aa15.79■□□□□ 0.12
CLPTM1-209ENST00000588855 AWAT2Q6E213 333 aa15.79■□□□□ 0.12
CLPTM1-209ENST00000588855 GLIPR1L1Q6UWM5 242 aa15.79■□□□□ 0.12
CLPTM1-209ENST00000588855 ZNF841Q6ZN19 808 aa15.79■□□□□ 0.12
CLPTM1-209ENST00000588855 FOXRED1Q96CU9 486 aaPredicted RBP15.79■□□□□ 0.12
CLPTM1-209ENST00000588855 S100A13Q99584 98 aa15.79■□□□□ 0.12
CLPTM1-209ENST00000588855 FUNDC2Q9BWH2 189 aa15.79■□□□□ 0.12
CLPTM1-209ENST00000588855 DNTTIP1Q9H147 329 aa15.79■□□□□ 0.12
CLPTM1-209ENST00000588855 METTL9Q9H1A3 318 aa15.79■□□□□ 0.12
CLPTM1-209ENST00000588855 METRNQ9UJH8 293 aa15.79■□□□□ 0.12
CLPTM1-209ENST00000588855 PHF1O43189 567 aaPredicted RBP15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 HTR3BO95264 441 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 CD37P11049 281 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 ZFP36P26651 326 aaKnown RBP15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 DUSP1P28562 367 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 OR10A3P58181 314 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 GNB2P62879 340 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 LCN2P80188 198 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 TIMM50Q3ZCQ8 353 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 C1orf100Q5SVJ3 147 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 SLC36A1Q7Z2H8 476 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 FGFRL1Q8N441 504 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 C1orf147Q96MC9 270 aaPredicted RBP15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 SSBP3Q9BWW4 388 aaPredicted RBP15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 RHOFQ9HBH0 211 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 IL36GQ9NZH8 169 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 A0A1W2PP11 408 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 KIAA1324LA8MWY0 1029 aaPredicted RBP15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 B4DSR2 109 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 SIGLEC5O15389 551 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 AIREO43918 545 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 SERPINA2P20848 420 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 PRDX2P32119 198 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 MTNR1BP49286 362 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 FGF12P61328 243 aa15.78■□□□□ 0.12
CLPTM1-209ENST00000588855 IL13RA1P78552 427 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms