RNA–Protein interactions for RNA: ENST00000587904.5

LINC01539-201, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 2 BASIC

Gene LINC01539, Length 2,068 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-201ENST00000587904 ZNF468Q5VIY5 522 aaPredicted RBP8.47□□□□□ -1.05
LINC01539-201ENST00000587904 NCR3LG1Q68D85 454 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 SSX7Q7RTT5 188 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 MDGA2Q7Z553 956 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 COMMD1Q8N668 190 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 INO80EQ8NBZ0 244 aaPredicted RBP8.47□□□□□ -1.05
LINC01539-201ENST00000587904 OR1J2Q8NGS2 313 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 OR52I2Q8NH67 350 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 CCDC107Q8WV48 283 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 PSMF1Q92530 271 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 HIST1H2BHQ93079 126 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 JSRP1Q96MG2 331 aaPredicted RBP8.47□□□□□ -1.05
LINC01539-201ENST00000587904 AMELYQ99218 206 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 HIST1H2BNQ99877 126 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 HIST1H2BMQ99879 126 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 MICU1Q9BPX6 476 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 SF3B5Q9BWJ5 86 aaKnown RBP8.47□□□□□ -1.05
LINC01539-201ENST00000587904 SLC25A31Q9H0C2 315 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 ELOVL3Q9HB03 270 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 LPAR2Q9HBW0 351 aa8.47□□□□□ -1.05
LINC01539-201ENST00000587904 ZNF318Q5VUA4 2279 aa8.46□□□□□ -1.05
LINC01539-201ENST00000587904 TRBV5-7A0A0A0MS05 114 aa8.46□□□□□ -1.05
LINC01539-201ENST00000587904 M0R036 132 aa8.46□□□□□ -1.05
LINC01539-201ENST00000587904 NME2P22392 152 aa8.46□□□□□ -1.05
LINC01539-201ENST00000587904 DCTDP32321 178 aa8.46□□□□□ -1.05
LINC01539-201ENST00000587904 RPS27P42677 84 aaKnown RBP8.46□□□□□ -1.05
LINC01539-201ENST00000587904 HIST3H3Q16695 136 aa8.46□□□□□ -1.05
LINC01539-201ENST00000587904 OR8G2PQ6IF36 304 aa8.46□□□□□ -1.05
LINC01539-201ENST00000587904 LRRC69Q6ZNQ3 347 aa8.46□□□□□ -1.05
LINC01539-201ENST00000587904 OR5M8Q8NGP6 311 aa8.46□□□□□ -1.05
LINC01539-201ENST00000587904 OR6N1Q8NGY5 312 aa8.46□□□□□ -1.05
LINC01539-201ENST00000587904 THOC3Q96J01 351 aaKnown RBP8.46□□□□□ -1.05
LINC01539-201ENST00000587904 AKR1E2Q96JD6 320 aa8.46□□□□□ -1.05
LINC01539-201ENST00000587904 HIST1H2BLQ99880 126 aa8.46□□□□□ -1.05
LINC01539-201ENST00000587904 MRPL15Q9P015 296 aaKnown RBP8.46□□□□□ -1.05
LINC01539-201ENST00000587904 BOKQ9UMX3 212 aaPredicted RBP8.46□□□□□ -1.05
LINC01539-201ENST00000587904 CACNA1HO95180 2353 aa8.46□□□□□ -1.06
LINC01539-201ENST00000587904 PCSK5Q92824 1860 aa8.46□□□□□ -1.06
LINC01539-201ENST00000587904 TEX13DA0A0J9YY54 714 aaPredicted RBP8.45□□□□□ -1.06
LINC01539-201ENST00000587904 LRRC3CA6NJW4 275 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 ACOT7O00154 380 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 PIN1P1O15428 100 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 OR2C1O95371 312 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 MELTFP08582 738 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 DNASE1L1P49184 302 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 SCAND1P57086 179 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 ODF4Q2M2E3 257 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 WDR38Q5JTN6 314 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 ABHD17BQ5VST6 288 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 BTNL8Q6UX41 500 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 RELTQ969Z4 430 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 FER1L6-AS2Q96M78 137 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 SELENOIQ9C0D9 397 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 HRH4Q9H3N8 390 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 PLEKHA2Q9HB19 425 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 MSL2Q9HCI7 577 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 LUZP4Q9P127 313 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 LRP12Q9Y561 859 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 R4GMQ9 66 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 LOC101059948A0A1B0GTJ6 334 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 G3V3Y1 287 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 XRCC3O43542 346 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 IL6RP08887 468 aaPredicted RBP8.45□□□□□ -1.06
LINC01539-201ENST00000587904 TMIGD3P0DMS9 266 aaPredicted RBP8.45□□□□□ -1.06
LINC01539-201ENST00000587904 ATF1P18846 271 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 CFPP27918 469 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 CD80P33681 288 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 SLC6A9P48067 706 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 B3GALT5-AS1P59052 145 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 NHLH1Q02575 133 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 HERPUD1Q15011 391 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 ZNF674Q2M3X9 581 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 SLC25A35Q3KQZ1 300 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 AWAT2Q6E213 333 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 ZNF529Q6P280 563 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 SLC25A47Q6Q0C1 308 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 CATSPERDQ86XM0 798 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 OR14L1PQ8NHC6 308 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 RNF133Q8WVZ7 376 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 FOXN4Q96NZ1 517 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 DIRC2Q96SL1 478 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 PRRX2Q99811 253 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 FAM173AQ9BQD7 235 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 EMC6Q9BV81 110 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 DNAJC4Q9NNZ3 241 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 PARP11Q9NR21 331 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 B4GALT7Q9UBV7 327 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 PITPNC1Q9UKF7 332 aa8.45□□□□□ -1.06
LINC01539-201ENST00000587904 KIR2DL5BA0A0G2JN68 375 aa8.44□□□□□ -1.06
LINC01539-201ENST00000587904 KIR2DL5BA0A0G2JPC4 375 aa8.44□□□□□ -1.06
LINC01539-201ENST00000587904 IFITM5A6NNB3 132 aa8.44□□□□□ -1.06
LINC01539-201ENST00000587904 A6NNC1 897 aa8.44□□□□□ -1.06
LINC01539-201ENST00000587904 AHRRA9YTQ3 701 aa8.44□□□□□ -1.06
LINC01539-201ENST00000587904 ZNF814B7Z6K7 855 aa8.44□□□□□ -1.06
LINC01539-201ENST00000587904 MASP2O00187 686 aa8.44□□□□□ -1.06
LINC01539-201ENST00000587904 SNRPBP14678 240 aaKnown RBP8.44□□□□□ -1.06
LINC01539-201ENST00000587904 HLA-GP17693 338 aa8.44□□□□□ -1.06
LINC01539-201ENST00000587904 ZNF133P52736 654 aaPredicted RBP8.44□□□□□ -1.06
LINC01539-201ENST00000587904 RAC3P60763 192 aa8.44□□□□□ -1.06
LINC01539-201ENST00000587904 ATP6V1FQ16864 119 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms